Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256631

Identifier: 89256631

GI number: 89256631

Start: 1262508

End: 1263689

Strand: Reverse

Name: 89256631

Synonym: FTL_1327

Alternate gene names: NA

Gene position: 1263689-1262508 (Counterclockwise)

Preceding gene: 89256632

Following gene: 89256630

Centisome position: 66.65

GC content: 27.83

Gene sequence:

>1182_bases
ATGAATGTCAAAATATTACCAATAGCAATAGATTTAGATGTTAAAAATACTGGTGTCTTTAGCGCATTTTATCAAAAAGG
AACTTCTCTTGAGAAATTGGATAATAAAAATGGCAAAGTATATGAACTATCAAAAGATTCTTATACTTTATTAATGAATA
ATAGAACAGCACAAAGACATCAAAGAAGAGGAATAGATAGAAAGCAGCTAGTCAAAAGGCTTTTTAAGCTTGTTTGGACA
GAGCAACTAAATTTAGAGTGGGATAAAGACACTCAACAAGCGATTAGCTTTTTGTTTAATCGTAGAGGTTTTAGTTTTAT
TACTGATGGTTATTCGACTGAATATTTAAATATTGTTCCAGAGCAAGTAAAAGCGATACTTATGGATATATTTGATGATT
ACAACGGTGAAGATGATTTAGACAGTTATTTAAAATTAGCTACTGAGCAAGAAAGCAAAATTTCTGAAATATATAACAAG
CTAATGCAAAAAATATTAGAGTTTAAATTAAGGAAATTATGTACTGATATTAAGGATGATAAAGTAAGTACTAAAACACT
TAAAGAAATCACAAGCTATGAATTTGAGTTATTAGCTGATTATTTAGCAAACTATAGCGAGAGTTTAAAAACACAAAAAT
TTAGTTATACAGATAAACAAGGTAATTTAAAAGAGCTAAGCTACTATCATCATGATAAATATAATATTCAAGAATTTCTA
AAGCGACATGCTACTATAAATGATGAAATTTTAGATACTCTTTTAACTGATGATTTTGATATTTGGAATTTTAATTTTGA
GAAATTTGATTTTGATAAGAATGAAGAAAAGCTTCAGAGTCAGGAAGATAAAGATCATACACAAGCGTATTTCCATCATT
TTGTTTTTGCAGTAAATAAAATAAAAAGTGAGATGGCAAGTGGTGGTCGTCATCGTAGCCAATATTTTCAAGAGATAACA
AATGTGCTAGATGAAAATAATCACCAAGAAGGATATCTCAAGAATTTCTGTGAAAATTTGCATAATAAAAAATATTCAAA
TTTAAGTGTTAAAAATTTAGTTAATCTAGTTGGTAACCTAAGTAATTTAGAGCTAAAACCGCTAAGAAAATATTTTAATG
ACAAAAATCTGATCATTGGGATGAGCAAAAGTTTACAGAAACTTATTGCCACTGGATATTAG

Upstream 100 bases:

>100_bases
TGTGAAGCTAGTTCCTAAAAGCTTTTATCCAAGTTTATAGATTTATGATTAAAAATTTATATCAAACTATTATTTTGTAC
AGAGTAAAAGAGGTCATTTT

Downstream 100 bases:

>100_bases
GAGAGTGGCGAGTAGGTGTCAAAGATCAAGATAAGAAAGATGGTGCTAAATATAGTTATAAAGATCTGTGTAATGAATTA
AAACAAAAGGTTACTAAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNVKILPIAIDLDVKNTGVFSAFYQKGTSLEKLDNKNGKVYELSKDSYTLLMNNRTAQRHQRRGIDRKQLVKRLFKLVWT
EQLNLEWDKDTQQAISFLFNRRGFSFITDGYSTEYLNIVPEQVKAILMDIFDDYNGEDDLDSYLKLATEQESKISEIYNK
LMQKILEFKLRKLCTDIKDDKVSTKTLKEITSYEFELLADYLANYSESLKTQKFSYTDKQGNLKELSYYHHDKYNIQEFL
KRHATINDEILDTLLTDDFDIWNFNFEKFDFDKNEEKLQSQEDKDHTQAYFHHFVFAVNKIKSEMASGGRHRSQYFQEIT
NVLDENNHQEGYLKNFCENLHNKKYSNLSVKNLVNLVGNLSNLELKPLRKYFNDKNLIIGMSKSLQKLIATGY

Sequences:

>Translated_393_residues
MNVKILPIAIDLDVKNTGVFSAFYQKGTSLEKLDNKNGKVYELSKDSYTLLMNNRTAQRHQRRGIDRKQLVKRLFKLVWT
EQLNLEWDKDTQQAISFLFNRRGFSFITDGYSTEYLNIVPEQVKAILMDIFDDYNGEDDLDSYLKLATEQESKISEIYNK
LMQKILEFKLRKLCTDIKDDKVSTKTLKEITSYEFELLADYLANYSESLKTQKFSYTDKQGNLKELSYYHHDKYNIQEFL
KRHATINDEILDTLLTDDFDIWNFNFEKFDFDKNEEKLQSQEDKDHTQAYFHHFVFAVNKIKSEMASGGRHRSQYFQEIT
NVLDENNHQEGYLKNFCENLHNKKYSNLSVKNLVNLVGNLSNLELKPLRKYFNDKNLIIGMSKSLQKLIATGY
>Mature_393_residues
MNVKILPIAIDLDVKNTGVFSAFYQKGTSLEKLDNKNGKVYELSKDSYTLLMNNRTAQRHQRRGIDRKQLVKRLFKLVWT
EQLNLEWDKDTQQAISFLFNRRGFSFITDGYSTEYLNIVPEQVKAILMDIFDDYNGEDDLDSYLKLATEQESKISEIYNK
LMQKILEFKLRKLCTDIKDDKVSTKTLKEITSYEFELLADYLANYSESLKTQKFSYTDKQGNLKELSYYHHDKYNIQEFL
KRHATINDEILDTLLTDDFDIWNFNFEKFDFDKNEEKLQSQEDKDHTQAYFHHFVFAVNKIKSEMASGGRHRSQYFQEIT
NVLDENNHQEGYLKNFCENLHNKKYSNLSVKNLVNLVGNLSNLELKPLRKYFNDKNLIIGMSKSLQKLIATGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46415; Mature: 46415

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKILPIAIDLDVKNTGVFSAFYQKGTSLEKLDNKNGKVYELSKDSYTLLMNNRTAQRH
CCEEEEEEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCEEEEECCCHHHHH
QRRGIDRKQLVKRLFKLVWTEQLNLEWDKDTQQAISFLFNRRGFSFITDGYSTEYLNIVP
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHH
EQVKAILMDIFDDYNGEDDLDSYLKLATEQESKISEIYNKLMQKILEFKLRKLCTDIKDD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KVSTKTLKEITSYEFELLADYLANYSESLKTQKFSYTDKQGNLKELSYYHHDKYNIQEFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHH
KRHATINDEILDTLLTDDFDIWNFNFEKFDFDKNEEKLQSQEDKDHTQAYFHHFVFAVNK
HHHCCCCHHHHHHHHCCCCCEECCCCHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
IKSEMASGGRHRSQYFQEITNVLDENNHQEGYLKNFCENLHNKKYSNLSVKNLVNLVGNL
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
SNLELKPLRKYFNDKNLIIGMSKSLQKLIATGY
CCCCHHHHHHHCCCCCEEEECHHHHHHHHHCCC
>Mature Secondary Structure
MNVKILPIAIDLDVKNTGVFSAFYQKGTSLEKLDNKNGKVYELSKDSYTLLMNNRTAQRH
CCEEEEEEEEEEECCCCHHHHHHHHCCCCHHHHCCCCCCEEEECCCCEEEEECCCHHHHH
QRRGIDRKQLVKRLFKLVWTEQLNLEWDKDTQQAISFLFNRRGFSFITDGYSTEYLNIVP
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHHHH
EQVKAILMDIFDDYNGEDDLDSYLKLATEQESKISEIYNKLMQKILEFKLRKLCTDIKDD
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KVSTKTLKEITSYEFELLADYLANYSESLKTQKFSYTDKQGNLKELSYYHHDKYNIQEFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHHH
KRHATINDEILDTLLTDDFDIWNFNFEKFDFDKNEEKLQSQEDKDHTQAYFHHFVFAVNK
HHHCCCCHHHHHHHHCCCCCEECCCCHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
IKSEMASGGRHRSQYFQEITNVLDENNHQEGYLKNFCENLHNKKYSNLSVKNLVNLVGNL
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
SNLELKPLRKYFNDKNLIIGMSKSLQKLIATGY
CCCCHHHHHHHCCCCCEEEECHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA