| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yhiN [H]
Identifier: 89256601
GI number: 89256601
Start: 1232299
End: 1232967
Strand: Direct
Name: yhiN [H]
Synonym: FTL_1292
Alternate gene names: 89256601
Gene position: 1232299-1232967 (Clockwise)
Preceding gene: 89256600
Following gene: 89256602
Centisome position: 64.99
GC content: 35.28
Gene sequence:
>669_bases ATGGGTGCTACAGGTTTTGGTTATAAGATTGCCAAAAAATTTGGGCTAAAAATAAATCCTCAACGCGCTGGGCTTGTACC TTTTGTATTTAATTCAGAGGATCAGCAAAAATTTGGTCAACTACGTGGTATTTCTATCTTCTGTCGGGTATCTAATCATC AAGCTAGTTTTGATGAAAATATTCTTTTTACTCATAAAGGTTTAAGTGGTCCAGCAATTTTACAAATATCTTCGTATTGG AATTCTGGAGAAAGCATTGAAATCGATCTATCGCCTAATATCAAAATTACTGATTTTCTAAACAACAAAAAAGATCAAGG CACCAAAACCACACTAAAAAACACGCTAATAGAATTATTACCTAAGAATTTTGTAGCTACTTTTTTCGATAGCGATATTC TCGAAAAAAGAGTGTGTGATTTAGCAATCGATGAGATTAGTTTAATTGCTAAAAAAATACATCAATGGCTAGTATATCCG CAAACGACCGAGGGTTACCGAACTGCAGAAGTTACTTTAGGTGGTGTTAGTTGTGATGAGCTATCATCTAAAATCCTAGA AACAAATAAAGTCAAAGGACTATATTTTATTGGCGAGGTCGTTGATGTCACTGGTTGGCTCGGTGGTTACAATTTCCAAT GGGCTTGGGCTTCTGGTCAAGTTGTATAA
Upstream 100 bases:
>100_bases TATTACTAAAAATGAAAACTTATTCTATATAACAACCAATACTGATGAATATACTTGTCAATCTCTAGTTATATCTACAG GTGGATTATCTATCCCAACT
Downstream 100 bases:
>100_bases GTATCAAAGCTAGGCTATAATTAATTAAACATTTATAAGTACTGTTTTGTGGTATGAAAATTCCAGCTGAGAAAGAGTTT GCAATAAAAAAAGCGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MGATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDENILFTHKGLSGPAILQISSYW NSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELLPKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYP QTTEGYRTAEVTLGGVSCDELSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV
Sequences:
>Translated_222_residues MGATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDENILFTHKGLSGPAILQISSYW NSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELLPKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYP QTTEGYRTAEVTLGGVSCDELSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV >Mature_221_residues GATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDENILFTHKGLSGPAILQISSYWN SGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELLPKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYPQ TTEGYRTAEVTLGGVSCDELSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=221, Percent_Identity=48.868778280543, Blast_Score=218, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 24752; Mature: 24620
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDEN CCCCCCCHHHHHHCCCEECCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCCCCC ILFTHKGLSGPAILQISSYWNSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELL EEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH PKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYPQTTEGYRTAEVTLGGVSCDE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCHHH LSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV HHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure GATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDEN CCCCCCHHHHHHCCCEECCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCCCCC ILFTHKGLSGPAILQISSYWNSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELL EEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH PKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYPQTTEGYRTAEVTLGGVSCDE HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCHHH LSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV HHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]