Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

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The map label for this gene is yhiN [H]

Identifier: 89256601

GI number: 89256601

Start: 1232299

End: 1232967

Strand: Direct

Name: yhiN [H]

Synonym: FTL_1292

Alternate gene names: 89256601

Gene position: 1232299-1232967 (Clockwise)

Preceding gene: 89256600

Following gene: 89256602

Centisome position: 64.99

GC content: 35.28

Gene sequence:

>669_bases
ATGGGTGCTACAGGTTTTGGTTATAAGATTGCCAAAAAATTTGGGCTAAAAATAAATCCTCAACGCGCTGGGCTTGTACC
TTTTGTATTTAATTCAGAGGATCAGCAAAAATTTGGTCAACTACGTGGTATTTCTATCTTCTGTCGGGTATCTAATCATC
AAGCTAGTTTTGATGAAAATATTCTTTTTACTCATAAAGGTTTAAGTGGTCCAGCAATTTTACAAATATCTTCGTATTGG
AATTCTGGAGAAAGCATTGAAATCGATCTATCGCCTAATATCAAAATTACTGATTTTCTAAACAACAAAAAAGATCAAGG
CACCAAAACCACACTAAAAAACACGCTAATAGAATTATTACCTAAGAATTTTGTAGCTACTTTTTTCGATAGCGATATTC
TCGAAAAAAGAGTGTGTGATTTAGCAATCGATGAGATTAGTTTAATTGCTAAAAAAATACATCAATGGCTAGTATATCCG
CAAACGACCGAGGGTTACCGAACTGCAGAAGTTACTTTAGGTGGTGTTAGTTGTGATGAGCTATCATCTAAAATCCTAGA
AACAAATAAAGTCAAAGGACTATATTTTATTGGCGAGGTCGTTGATGTCACTGGTTGGCTCGGTGGTTACAATTTCCAAT
GGGCTTGGGCTTCTGGTCAAGTTGTATAA

Upstream 100 bases:

>100_bases
TATTACTAAAAATGAAAACTTATTCTATATAACAACCAATACTGATGAATATACTTGTCAATCTCTAGTTATATCTACAG
GTGGATTATCTATCCCAACT

Downstream 100 bases:

>100_bases
GTATCAAAGCTAGGCTATAATTAATTAAACATTTATAAGTACTGTTTTGTGGTATGAAAATTCCAGCTGAGAAAGAGTTT
GCAATAAAAAAAGCGATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MGATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDENILFTHKGLSGPAILQISSYW
NSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELLPKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYP
QTTEGYRTAEVTLGGVSCDELSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV

Sequences:

>Translated_222_residues
MGATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDENILFTHKGLSGPAILQISSYW
NSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELLPKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYP
QTTEGYRTAEVTLGGVSCDELSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV
>Mature_221_residues
GATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDENILFTHKGLSGPAILQISSYWN
SGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELLPKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYPQ
TTEGYRTAEVTLGGVSCDELSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0933 [H]

Homologues:

Organism=Escherichia coli, GI2367234, Length=221, Percent_Identity=48.868778280543, Blast_Score=218, Evalue=3e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027
- InterPro:   IPR023166 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 24752; Mature: 24620

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDEN
CCCCCCCHHHHHHCCCEECCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCCCCC
ILFTHKGLSGPAILQISSYWNSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELL
EEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
PKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYPQTTEGYRTAEVTLGGVSCDE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCHHH
LSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV
HHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCC
>Mature Secondary Structure 
GATGFGYKIAKKFGLKINPQRAGLVPFVFNSEDQQKFGQLRGISIFCRVSNHQASFDEN
CCCCCCHHHHHHCCCEECCCCCCEEEEEECCCHHHHHHHHCCEEEEEEECCCCCCCCCC
ILFTHKGLSGPAILQISSYWNSGESIEIDLSPNIKITDFLNNKKDQGTKTTLKNTLIELL
EEEEECCCCCCEEEEEECCCCCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHH
PKNFVATFFDSDILEKRVCDLAIDEISLIAKKIHQWLVYPQTTEGYRTAEVTLGGVSCDE
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCHHH
LSSKILETNKVKGLYFIGEVVDVTGWLGGYNFQWAWASGQVV
HHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]