| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yhiN [H]
Identifier: 89256600
GI number: 89256600
Start: 1231849
End: 1232166
Strand: Direct
Name: yhiN [H]
Synonym: FTL_1291
Alternate gene names: 89256600
Gene position: 1231849-1232166 (Clockwise)
Preceding gene: 89256599
Following gene: 89256601
Centisome position: 64.97
GC content: 35.53
Gene sequence:
>318_bases ATGTGTGCTATAGAAGCTGCAAAAAGAGCTCGTAAAATTCTGGTACTAGACCACGCTAATAAGATCGGTAAAAAAATACT AATGTCAGGTGGTGGGAGCTGTAATTTCACCAACTATAATATTGCTGCTGATAGATATCTAGCTGATAATCCACACTTCA TGAAATCTACACTTTCTCGATATACTCAGTGGGACTTCATTGCAATGGTAAATGATTATAATATCCCCTACCATGAAAAA ACTCTAGGTCAGCTCTTTTGTGATAATAAAGCTAAAGATATCGTCAATATGCTTCTAGATGAATGCCAAAAGTACTAA
Upstream 100 bases:
>100_bases ATGGCATTTTTATTAGACATTATAACATTTCTACAAATATCTTTTTCTACAAATATCTTTCGGATTAACTATAATAATCG GTGCCGGTGCTGCTGGACTT
Downstream 100 bases:
>100_bases GCCAAGATACAATTACATACAACTATTGAAAATATTACTAAAAATGAAAACTTATTCTATATAACAACCAATACTGATGA ATATACTTGTCAATCTCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MCAIEAAKRARKILVLDHANKIGKKILMSGGGSCNFTNYNIAADRYLADNPHFMKSTLSRYTQWDFIAMVNDYNIPYHEK TLGQLFCDNKAKDIVNMLLDECQKY
Sequences:
>Translated_105_residues MCAIEAAKRARKILVLDHANKIGKKILMSGGGSCNFTNYNIAADRYLADNPHFMKSTLSRYTQWDFIAMVNDYNIPYHEK TLGQLFCDNKAKDIVNMLLDECQKY >Mature_105_residues MCAIEAAKRARKILVLDHANKIGKKILMSGGGSCNFTNYNIAADRYLADNPHFMKSTLSRYTQWDFIAMVNDYNIPYHEK TLGQLFCDNKAKDIVNMLLDECQKY
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0933 [H]
Homologues:
Organism=Escherichia coli, GI2367234, Length=103, Percent_Identity=57.2815533980583, Blast_Score=141, Evalue=9e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 - InterPro: IPR023166 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 12042; Mature: 12042
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAIEAAKRARKILVLDHANKIGKKILMSGGGSCNFTNYNIAADRYLADNPHFMKSTLSR CCCCHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHH YTQWDFIAMVNDYNIPYHEKTLGQLFCDNKAKDIVNMLLDECQKY HCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MCAIEAAKRARKILVLDHANKIGKKILMSGGGSCNFTNYNIAADRYLADNPHFMKSTLSR CCCCHHHHHCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHH YTQWDFIAMVNDYNIPYHEKTLGQLFCDNKAKDIVNMLLDECQKY HCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]