| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is 89256583
Identifier: 89256583
GI number: 89256583
Start: 1214904
End: 1215641
Strand: Direct
Name: 89256583
Synonym: FTL_1274
Alternate gene names: NA
Gene position: 1214904-1215641 (Clockwise)
Preceding gene: 89256582
Following gene: 89256584
Centisome position: 64.08
GC content: 25.07
Gene sequence:
>738_bases ATGAGTATATACGATCAAATTAGAGGTAACTTTTCAAAAGCTACAGAATATTCTAAAAATTCGGCTATTCAAAATCAAGT TCGCCAACTACTTTTAGAACAAACGCTGAATTATTCAAGATTAGTGAATTATAATCATATAAATATAATCTTAAATTTAG GAGTTCGTGATTTATCTGAACCGTTGGAGTTAAATAGAATATTTTCACCTAATCAAATTGATGCTTGTGATATTGCTTTA TCAAAAAATTCACATAATATGAGCAATATAAAAATGCTAAAAATCAATTTCGATAAAGATTTACGCCTACTTAAAAATGA CTATGATTTAATATTTTCAAATATGTCATTTCAATGGAGTCAAAATATAGAAAAACTAATTAGAAATCTCACAAAAAAAT TAAATAACCGTGCAATTTTAGCTTTTACTACTCTTCTTGATAAAAATTTTCATCAAATAAAAGATATTTTGAGAGTCAAT AAAATGCATAGTTGTTCTAATATTTTAGACTTTATTAAAAGATCTAATTTAAAGTGTCTACATCATGAAGATTTATATTT AGATGTTAGATTTAGTAATTTTCGAGAATTAGCAAATCATCTAAAATCTACAGGCGTTAATACATACACTGGTAATGATA ACAAACAAAATTTCTCGAGTATTAGAAAGCTTTGTTTAAGCTCTAATCATATAAACCTCAGTTACCATGTTGGTCTATTT ATTTGTTTTAAGGAATAA
Upstream 100 bases:
>100_bases GTACCTAAAGACCAAGCTATACTAAGATTTTCGCTACATAGTAATAATACTTTTGATCAGATTCAACAAGCTTTAGAAAT TATTTCCAAAGAGGTTAAGT
Downstream 100 bases:
>100_bases GTTATGAAAAAGTTTTTTATCATTGGTACGAATACCGAAGTAGGTAAAACATATATATCAACCAAGCTTATTGAAGTTTG TGAGCATCAGAATATTAAAT
Product: biotin synthesis protein BioC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSIYDQIRGNFSKATEYSKNSAIQNQVRQLLLEQTLNYSRLVNYNHINIILNLGVRDLSEPLELNRIFSPNQIDACDIAL SKNSHNMSNIKMLKINFDKDLRLLKNDYDLIFSNMSFQWSQNIEKLIRNLTKKLNNRAILAFTTLLDKNFHQIKDILRVN KMHSCSNILDFIKRSNLKCLHHEDLYLDVRFSNFRELANHLKSTGVNTYTGNDNKQNFSSIRKLCLSSNHINLSYHVGLF ICFKE
Sequences:
>Translated_245_residues MSIYDQIRGNFSKATEYSKNSAIQNQVRQLLLEQTLNYSRLVNYNHINIILNLGVRDLSEPLELNRIFSPNQIDACDIAL SKNSHNMSNIKMLKINFDKDLRLLKNDYDLIFSNMSFQWSQNIEKLIRNLTKKLNNRAILAFTTLLDKNFHQIKDILRVN KMHSCSNILDFIKRSNLKCLHHEDLYLDVRFSNFRELANHLKSTGVNTYTGNDNKQNFSSIRKLCLSSNHINLSYHVGLF ICFKE >Mature_244_residues SIYDQIRGNFSKATEYSKNSAIQNQVRQLLLEQTLNYSRLVNYNHINIILNLGVRDLSEPLELNRIFSPNQIDACDIALS KNSHNMSNIKMLKINFDKDLRLLKNDYDLIFSNMSFQWSQNIEKLIRNLTKKLNNRAILAFTTLLDKNFHQIKDILRVNK MHSCSNILDFIKRSNLKCLHHEDLYLDVRFSNFRELANHLKSTGVNTYTGNDNKQNFSSIRKLCLSSNHINLSYHVGLFI CFKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28691; Mature: 28560
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYDQIRGNFSKATEYSKNSAIQNQVRQLLLEQTLNYSRLVNYNHINIILNLGVRDLSE CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCEEEEEEECCCHHHCC PLELNRIFSPNQIDACDIALSKNSHNMSNIKMLKINFDKDLRLLKNDYDLIFSNMSFQWS CHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCHHEEEECCCCHHH QNIEKLIRNLTKKLNNRAILAFTTLLDKNFHQIKDILRVNKMHSCSNILDFIKRSNLKCL HHHHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE HHEDLYLDVRFSNFRELANHLKSTGVNTYTGNDNKQNFSSIRKLCLSSNHINLSYHVGLF ECCCEEEEEEHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE ICFKE EEEEC >Mature Secondary Structure SIYDQIRGNFSKATEYSKNSAIQNQVRQLLLEQTLNYSRLVNYNHINIILNLGVRDLSE CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCEEEEEEECCCHHHCC PLELNRIFSPNQIDACDIALSKNSHNMSNIKMLKINFDKDLRLLKNDYDLIFSNMSFQWS CHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCHHHHHHCCHHEEEECCCCHHH QNIEKLIRNLTKKLNNRAILAFTTLLDKNFHQIKDILRVNKMHSCSNILDFIKRSNLKCL HHHHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE HHEDLYLDVRFSNFRELANHLKSTGVNTYTGNDNKQNFSSIRKLCLSSNHINLSYHVGLF ECCCEEEEEEHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEEE ICFKE EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA