| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is lip2 [H]
Identifier: 89256578
GI number: 89256578
Start: 1208889
End: 1209809
Strand: Direct
Name: lip2 [H]
Synonym: FTL_1266
Alternate gene names: 89256578
Gene position: 1208889-1209809 (Clockwise)
Preceding gene: 89256577
Following gene: 89256579
Centisome position: 63.76
GC content: 32.46
Gene sequence:
>921_bases ATGCCATACAATCCATCATTAGAAGCATTATTAGACACTCCTGAAATAAGAAGAATTAAAAAGCTTGATTTAACACAGCA GCGTGAAATTTTTACTAGTCTTTCGGTAGAACAGCTTAAGCGTTTACCGCGTCCTGATATTCTTGAAGAAGATATTAAGC TAGAAAATAATACCATACTAAGACATTATCAACCTAAAAAATCCTCTAATAAAGCTGTACTTTTTATCCATGGTGGTGGA TGGTGCTTAGGTTCGATAAATACTTATGATCATGTATGTAGGTACCTATGTGATCAAGGAAATTTAAATATCTTCTCGCT AGAATATGGTCTAGCACCTGAACAAAAATATCCAGCAGCTGTTGATCATGCTTTGTACGCTTACGATTGGCTATATCAAA ATATCAATAAATTTAAAATTTCTGCTGAAAATATCTTTGTAATGGGTGATAGCGCTGGAGGTAATCTAGTTACTATAGTT TGTCATGAACGTCAAGAAAATATGCCAAAAGCACAAATTTTGGTCTACCCTGCTGTTGATATGTATACGAAATACGATAG TAATAAAAAATTTGATGAAAACAAATATCATTTAACTACAGAATGGTGTGAACTATTCCTCAAAGCGTATATAGGTGAAG ATGTTATGTCAGAGCCTAAAAAACTTAGACATCCTACAATATCTCCACTTTTTTATAAAGATACAAAGCAGCCAGATACT CTAATTGTAGCAGCTACTCATGATATCCTAATAGATGGTATTTATGCTTATGAAGAAAAATTAAAACAGCAAGGAACTTA TGTTGAAACTTACTACGATGATGAAATGTTTCATGGTTTCATGGGCATACTTGGTATAACTCCGTTTGAAAATCCTAAAA TAGCTTTGAATAAGGTGATTGAGTTTATAAACAAAAGATAA
Upstream 100 bases:
>100_bases TTTAGCAACTTTAGATCGAGCTACAAGAGAGCTTTCAAGAAAATTAGAGAAACTAGATATTGATATTATAAGAGTACACA AGATTTAATAAGGAAATATT
Downstream 100 bases:
>100_bases ATATTGGTTTGATATATGACTCCATTTTTTAAAACTGATAAAAAATCTGGCGAAAAATCAGAAGAACTTATTAAAAGATT TAATGACTTACCTGCTTTTG
Product: lipase/esterase
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MPYNPSLEALLDTPEIRRIKKLDLTQQREIFTSLSVEQLKRLPRPDILEEDIKLENNTILRHYQPKKSSNKAVLFIHGGG WCLGSINTYDHVCRYLCDQGNLNIFSLEYGLAPEQKYPAAVDHALYAYDWLYQNINKFKISAENIFVMGDSAGGNLVTIV CHERQENMPKAQILVYPAVDMYTKYDSNKKFDENKYHLTTEWCELFLKAYIGEDVMSEPKKLRHPTISPLFYKDTKQPDT LIVAATHDILIDGIYAYEEKLKQQGTYVETYYDDEMFHGFMGILGITPFENPKIALNKVIEFINKR
Sequences:
>Translated_306_residues MPYNPSLEALLDTPEIRRIKKLDLTQQREIFTSLSVEQLKRLPRPDILEEDIKLENNTILRHYQPKKSSNKAVLFIHGGG WCLGSINTYDHVCRYLCDQGNLNIFSLEYGLAPEQKYPAAVDHALYAYDWLYQNINKFKISAENIFVMGDSAGGNLVTIV CHERQENMPKAQILVYPAVDMYTKYDSNKKFDENKYHLTTEWCELFLKAYIGEDVMSEPKKLRHPTISPLFYKDTKQPDT LIVAATHDILIDGIYAYEEKLKQQGTYVETYYDDEMFHGFMGILGITPFENPKIALNKVIEFINKR >Mature_305_residues PYNPSLEALLDTPEIRRIKKLDLTQQREIFTSLSVEQLKRLPRPDILEEDIKLENNTILRHYQPKKSSNKAVLFIHGGGW CLGSINTYDHVCRYLCDQGNLNIFSLEYGLAPEQKYPAAVDHALYAYDWLYQNINKFKISAENIFVMGDSAGGNLVTIVC HERQENMPKAQILVYPAVDMYTKYDSNKKFDENKYHLTTEWCELFLKAYIGEDVMSEPKKLRHPTISPLFYKDTKQPDTL IVAATHDILIDGIYAYEEKLKQQGTYVETYYDDEMFHGFMGILGITPFENPKIALNKVIEFINKR
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI68299767, Length=295, Percent_Identity=25.4237288135593, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI157041239, Length=323, Percent_Identity=22.2910216718266, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI206597554, Length=354, Percent_Identity=22.8813559322034, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI68051721, Length=282, Percent_Identity=23.758865248227, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1786682, Length=203, Percent_Identity=26.1083743842365, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567059, Length=297, Percent_Identity=26.2626262626263, Blast_Score=107, Evalue=7e-24, Organism=Caenorhabditis elegans, GI17540028, Length=306, Percent_Identity=27.4509803921569, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI72001146, Length=134, Percent_Identity=37.3134328358209, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI71996133, Length=141, Percent_Identity=36.1702127659575, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI115533410, Length=88, Percent_Identity=37.5, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI115533412, Length=88, Percent_Identity=37.5, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24656084, Length=117, Percent_Identity=32.4786324786325, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI24656076, Length=117, Percent_Identity=32.4786324786325, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI20130169, Length=117, Percent_Identity=32.4786324786325, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 35510; Mature: 35379
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYNPSLEALLDTPEIRRIKKLDLTQQREIFTSLSVEQLKRLPRPDILEEDIKLENNTIL CCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHCEECCCEEE RHYQPKKSSNKAVLFIHGGGWCLGSINTYDHVCRYLCDQGNLNIFSLEYGLAPEQKYPAA EEECCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH VDHALYAYDWLYQNINKFKISAENIFVMGDSAGGNLVTIVCHERQENMPKAQILVYPAVD HHHHHHHHHHHHHCCHHEEEEECEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECHH MYTKYDSNKKFDENKYHLTTEWCELFLKAYIGEDVMSEPKKLRHPTISPLFYKDTKQPDT HHEECCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHCHHHHCCCCCCCEEECCCCCCCE LIVAATHDILIDGIYAYEEKLKQQGTYVETYYDDEMFHGFMGILGITPFENPKIALNKVI EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHH EFINKR HHHHCC >Mature Secondary Structure PYNPSLEALLDTPEIRRIKKLDLTQQREIFTSLSVEQLKRLPRPDILEEDIKLENNTIL CCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCHHHCEECCCEEE RHYQPKKSSNKAVLFIHGGGWCLGSINTYDHVCRYLCDQGNLNIFSLEYGLAPEQKYPAA EEECCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHH VDHALYAYDWLYQNINKFKISAENIFVMGDSAGGNLVTIVCHERQENMPKAQILVYPAVD HHHHHHHHHHHHHCCHHEEEEECEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECHH MYTKYDSNKKFDENKYHLTTEWCELFLKAYIGEDVMSEPKKLRHPTISPLFYKDTKQPDT HHEECCCCCCCCCCCEEEEHHHHHHHHHHHHCCHHHHCHHHHCCCCCCCEEECCCCCCCE LIVAATHDILIDGIYAYEEKLKQQGTYVETYYDDEMFHGFMGILGITPFENPKIALNKVI EEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHH EFINKR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]