Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256509
Identifier: 89256509
GI number: 89256509
Start: 1135935
End: 1137119
Strand: Reverse
Name: 89256509
Synonym: FTL_1188
Alternate gene names: NA
Gene position: 1137119-1135935 (Counterclockwise)
Preceding gene: 89256510
Following gene: 89256508
Centisome position: 59.97
GC content: 30.13
Gene sequence:
>1185_bases ATGACTGATACAAAACATTTTGATACTATTATAATTGGTGCTGGAATTTCAGGTATATCTTTAGCACAACGATTAACTGC TGCATCTGTAAAAAATTGTGTCTTTGAGGCTAATAAGGTCGGCGGTTGTATTGACTCTCAACAATACGAAGATTTTTGGT TTGAGATGGGAGCACACACCATATACAACTCTTACAATAAAACTATAGAATATATCCACAGTAACTCTCTTGGAAAAGAT ATCCAACCAAGAAAAAAGCTACCATTCTTATTTGTTCAACCAAACAATAAAATTCAAAGTATTTTTATAAATATTAATCC ATTTACAGCAGCTCTTAGTTTTTTGAAAAACAGAAAAGTCTCAAAACAAGATAAAACTGTTAGCGAATATGCCACAAAGC TATTTGGCAAAAAAAATTATAGTAAAACTTTGAAGTATTGTTTTGACGCTGTACTATCCCAAGATAGTCAAGAGTTCCCG ATGGAGTATTTATTTAAGAAATATGATAGAGATACGACACTGCCACGAAGTTTTACTCTAAAAAATGGTTTAGCTGAACT TTTCAAAAACCACAACGAAAATGTTATTAAAGAGACTGTCATAAAGATAACAAAACAGCAAAAATGGCACATACATACAA AACACGGCGAATATACTTGTGAAAATCTTTGTTTGGCAACACCATGGAATGTAACCGAATTACTATTAGAAAAAATATTA CCTAATATAGCAAAACATCAATATAGACCTACAATGTCGAATCTAATAAGCGTAGGAATTGTTACAAATAAATCAAGCTT GAAACATATTAAAAACTTAGCTGGCTTAATCGGTAAAGAACAATTTTTTTACTCAACAGTCTCTAGAGATGTTATAGATA ACCCAAACTATAGGGCAATTGTTTTTCACTGTCGTGATGAATTTTCTCAAGAAGAATTACTTGATAAAATTATAGAATTA CTAAAAATAAAACCAGATCATATCATATACACTTATACAAAAAACAATACACTACCTTGCTATCATCGTAAGCATAGTGC TTTTATAGCAGATCTTGAAAAAGAATTACAAAATCAGCCAAATCTATATATTAGTGGTAATTTTTTTGACAGACTAGCTA TAGAAAATTGTATTAGAAGGTCAAATGAACAAGCAGGTAAAATTATTCAAAATAAAATCCCTTAA
Upstream 100 bases:
>100_bases GGCGCTATCAGAAGTGATGTATTTTGGGGACATGGTAAGCAAGCAGAATTTAACGCCGGCCATATGAATAACCGCGGCAA ACTATGGATACTTTTACCAA
Downstream 100 bases:
>100_bases TGATTTGATTATTTGACACGAAAAATGTATCATATAGTCTGCTTAAAATCTTAAAGTCAAACAAGCTAAAACTAGCTTGC GAATCAAGAATTTTTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Amine Oxidase; Protoporphyrinogen Oxidase; Protoporphyrinogen Oxidase-Like Protein
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTDTKHFDTIIIGAGISGISLAQRLTAASVKNCVFEANKVGGCIDSQQYEDFWFEMGAHTIYNSYNKTIEYIHSNSLGKD IQPRKKLPFLFVQPNNKIQSIFININPFTAALSFLKNRKVSKQDKTVSEYATKLFGKKNYSKTLKYCFDAVLSQDSQEFP MEYLFKKYDRDTTLPRSFTLKNGLAELFKNHNENVIKETVIKITKQQKWHIHTKHGEYTCENLCLATPWNVTELLLEKIL PNIAKHQYRPTMSNLISVGIVTNKSSLKHIKNLAGLIGKEQFFYSTVSRDVIDNPNYRAIVFHCRDEFSQEELLDKIIEL LKIKPDHIIYTYTKNNTLPCYHRKHSAFIADLEKELQNQPNLYISGNFFDRLAIENCIRRSNEQAGKIIQNKIP
Sequences:
>Translated_394_residues MTDTKHFDTIIIGAGISGISLAQRLTAASVKNCVFEANKVGGCIDSQQYEDFWFEMGAHTIYNSYNKTIEYIHSNSLGKD IQPRKKLPFLFVQPNNKIQSIFININPFTAALSFLKNRKVSKQDKTVSEYATKLFGKKNYSKTLKYCFDAVLSQDSQEFP MEYLFKKYDRDTTLPRSFTLKNGLAELFKNHNENVIKETVIKITKQQKWHIHTKHGEYTCENLCLATPWNVTELLLEKIL PNIAKHQYRPTMSNLISVGIVTNKSSLKHIKNLAGLIGKEQFFYSTVSRDVIDNPNYRAIVFHCRDEFSQEELLDKIIEL LKIKPDHIIYTYTKNNTLPCYHRKHSAFIADLEKELQNQPNLYISGNFFDRLAIENCIRRSNEQAGKIIQNKIP >Mature_393_residues TDTKHFDTIIIGAGISGISLAQRLTAASVKNCVFEANKVGGCIDSQQYEDFWFEMGAHTIYNSYNKTIEYIHSNSLGKDI QPRKKLPFLFVQPNNKIQSIFININPFTAALSFLKNRKVSKQDKTVSEYATKLFGKKNYSKTLKYCFDAVLSQDSQEFPM EYLFKKYDRDTTLPRSFTLKNGLAELFKNHNENVIKETVIKITKQQKWHIHTKHGEYTCENLCLATPWNVTELLLEKILP NIAKHQYRPTMSNLISVGIVTNKSSLKHIKNLAGLIGKEQFFYSTVSRDVIDNPNYRAIVFHCRDEFSQEELLDKIIELL KIKPDHIIYTYTKNNTLPCYHRKHSAFIADLEKELQNQPNLYISGNFFDRLAIENCIRRSNEQAGKIIQNKIP
Specific function: Unknown
COG id: COG1232
COG function: function code H; Protoporphyrinogen oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45554; Mature: 45423
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTKHFDTIIIGAGISGISLAQRLTAASVKNCVFEANKVGGCIDSQQYEDFWFEMGAHT CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IYNSYNKTIEYIHSNSLGKDIQPRKKLPFLFVQPNNKIQSIFININPFTAALSFLKNRKV HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHCCCC SKQDKTVSEYATKLFGKKNYSKTLKYCFDAVLSQDSQEFPMEYLFKKYDRDTTLPRSFTL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHH KNGLAELFKNHNENVIKETVIKITKQQKWHIHTKHGEYTCENLCLATPWNVTELLLEKIL HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCEECCCEEEECCCCHHHHHHHHHH PNIAKHQYRPTMSNLISVGIVTNKSSLKHIKNLAGLIGKEQFFYSTVSRDVIDNPNYRAI HHHHHHCCCCCHHHHEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEE VFHCRDEFSQEELLDKIIELLKIKPDHIIYTYTKNNTLPCYHRKHSAFIADLEKELQNQP EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC NLYISGNFFDRLAIENCIRRSNEQAGKIIQNKIP CEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure TDTKHFDTIIIGAGISGISLAQRLTAASVKNCVFEANKVGGCIDSQQYEDFWFEMGAHT CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IYNSYNKTIEYIHSNSLGKDIQPRKKLPFLFVQPNNKIQSIFININPFTAALSFLKNRKV HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHHCCCC SKQDKTVSEYATKLFGKKNYSKTLKYCFDAVLSQDSQEFPMEYLFKKYDRDTTLPRSFTL CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHH KNGLAELFKNHNENVIKETVIKITKQQKWHIHTKHGEYTCENLCLATPWNVTELLLEKIL HHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCCCEECCCEEEECCCCHHHHHHHHHH PNIAKHQYRPTMSNLISVGIVTNKSSLKHIKNLAGLIGKEQFFYSTVSRDVIDNPNYRAI HHHHHHCCCCCHHHHEEEEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEE VFHCRDEFSQEELLDKIIELLKIKPDHIIYTYTKNNTLPCYHRKHSAFIADLEKELQNQP EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC NLYISGNFFDRLAIENCIRRSNEQAGKIIQNKIP CEEEECCHHHHHHHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA