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The map label for this gene is 89256451

Identifier: 89256451

GI number: 89256451

Start: 1071249

End: 1071476

Strand: Reverse

Name: 89256451

Synonym: FTL_1126

Alternate gene names: NA

Gene position: 1071476-1071249 (Counterclockwise)

Preceding gene: 89256455

Following gene: 89256450

Centisome position: 56.51

GC content: 35.09

Gene sequence:

>228_bases
ATGCAAAAAAACATATTTAATACTAAAGACTTAGGTTTATTAATTAGGAAAGCTAGAAAAAAACAAGGGTTAACTCAAGC
TGATCTTTCTGGTATTTCTGGGCTAGGAACTAGATTTATAGGCGAAGTCGAAAATGGTAAAAATACGGCTCATATCGGAA
AGGTTATACAACTTGCTAGTAGTTTAGGCTTGGTAATTTCTGTTGGCTGTGATTGGATGGAGGACTGA

Upstream 100 bases:

>100_bases
AGGATAAATATATAAAAAGTATATATAATAATACCGTACGGTAATTAATATTATCTTTTTTGAGGTTGCTACATAGATTC
TTACCGATGAGGAATATAAT

Downstream 100 bases:

>100_bases
TAATGTCTAACCAACTAAATGTCCATTTGAAAGACATACATATTGGATATCTAAAAAAACAAGGTTCAAAACTAAGCTTT
AACTATTCAAAAGAATATTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLASSLGLVISVGCDWMED

Sequences:

>Translated_75_residues
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLASSLGLVISVGCDWMED
>Mature_75_residues
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLASSLGLVISVGCDWMED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR017507 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8086; Mature: 8086

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLAS
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
SLGLVISVGCDWMED
HCCEEEECCCCCCCC
>Mature Secondary Structure
MQKNIFNTKDLGLLIRKARKKQGLTQADLSGISGLGTRFIGEVENGKNTAHIGKVIQLAS
CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
SLGLVISVGCDWMED
HCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]