Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256334
Identifier: 89256334
GI number: 89256334
Start: 958456
End: 958968
Strand: Direct
Name: 89256334
Synonym: FTL_0988
Alternate gene names: NA
Gene position: 958456-958968 (Clockwise)
Preceding gene: 89256327
Following gene: 89256335
Centisome position: 50.55
GC content: 30.02
Gene sequence:
>513_bases ATGCTCAAGAAAATTACGAATAATTTTGGTTTAGCTATAGGCATTATCGGATTGATTATATTTATGTTTGGTCTAACAGA AACTGATACTGCTCAGAAAAATCTAATAGTTCTTTTTGCTACTTTCTTCTTATTTTTATCAGCTGCTATCCAAAAAGAGC CTTTTTTTACTGGTTTACAAGGAATAGCATTTGTAAGTGCTATTATGGTTTTTTATAATTTAGCGGCGATATATAATTTG TTAGTGTTTATATTTCTAGCATTTGTGTTTGCCATTTACTACTTCTCTAGGCATAAATTAAATATTGCTAGAATATGTGC TTTTATAGGATTGGTTGCATTATGTCTTGGTATACTTTTAGGCAGAAATGAACCAATGGTAGTGTGTGGTATTGTTTTGG CAATTTATGCGGTATTTTCTATCCAAGAGGGTTATACAGTTGGTTGGATATTTCTAATACTTAATATACTATTTGCAGTT GTTGCAGCTAATGCATTGTATAGTTTTTATTAA
Upstream 100 bases:
>100_bases GTTTAGTCGTTATTCAATGAAAAGTTTTGTAAGCTTTATAGTTTATAATTATAATTATAATTATAATTGTAATTAAATAA ACTTATTAGTTGATTAATTG
Downstream 100 bases:
>100_bases TTAAGGCTTTAAATTATGAGAAAGTTATCATTTTTAGATAGGGTTATCGAGGAGCTTGATAGTTATGCTAGATTTACAAA GGTACCATTAAACCCAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLKKITNNFGLAIGIIGLIIFMFGLTETDTAQKNLIVLFATFFLFLSAAIQKEPFFTGLQGIAFVSAIMVFYNLAAIYNL LVFIFLAFVFAIYYFSRHKLNIARICAFIGLVALCLGILLGRNEPMVVCGIVLAIYAVFSIQEGYTVGWIFLILNILFAV VAANALYSFY
Sequences:
>Translated_170_residues MLKKITNNFGLAIGIIGLIIFMFGLTETDTAQKNLIVLFATFFLFLSAAIQKEPFFTGLQGIAFVSAIMVFYNLAAIYNL LVFIFLAFVFAIYYFSRHKLNIARICAFIGLVALCLGILLGRNEPMVVCGIVLAIYAVFSIQEGYTVGWIFLILNILFAV VAANALYSFY >Mature_170_residues MLKKITNNFGLAIGIIGLIIFMFGLTETDTAQKNLIVLFATFFLFLSAAIQKEPFFTGLQGIAFVSAIMVFYNLAAIYNL LVFIFLAFVFAIYYFSRHKLNIARICAFIGLVALCLGILLGRNEPMVVCGIVLAIYAVFSIQEGYTVGWIFLILNILFAV VAANALYSFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18903; Mature: 18903
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKITNNFGLAIGIIGLIIFMFGLTETDTAQKNLIVLFATFFLFLSAAIQKEPFFTGLQ CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GIAFVSAIMVFYNLAAIYNLLVFIFLAFVFAIYYFSRHKLNIARICAFIGLVALCLGILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GRNEPMVVCGIVLAIYAVFSIQEGYTVGWIFLILNILFAVVAANALYSFY CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKKITNNFGLAIGIIGLIIFMFGLTETDTAQKNLIVLFATFFLFLSAAIQKEPFFTGLQ CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH GIAFVSAIMVFYNLAAIYNLLVFIFLAFVFAIYYFSRHKLNIARICAFIGLVALCLGILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GRNEPMVVCGIVLAIYAVFSIQEGYTVGWIFLILNILFAVVAANALYSFY CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA