Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256327
Identifier: 89256327
GI number: 89256327
Start: 949617
End: 951023
Strand: Direct
Name: 89256327
Synonym: FTL_0980
Alternate gene names: NA
Gene position: 949617-951023 (Clockwise)
Preceding gene: 89256326
Following gene: 89256334
Centisome position: 50.09
GC content: 27.58
Gene sequence:
>1407_bases TTGAAAGAAGGATATTCATTAGAAGAATTAAGAAGGATACTAGAAGTTTATCCAAGTAATGAAGTTTTTGAGTATTTTTA TAATGCTTTACTTAGTGAAATGATAACTGATATTCAGATATTTTTTAATGATGATAATTTAACAATTGGCGATTTAAGTG AAGGAGAAAAAAAGCTTTTATTACTTAAAGCAGCCTTTGAGTTTGTAGCTCAGGAAGATAGCTTATTTATGCTAGATGAA CCAGATTCACACATTCATTTAGATAATAAGAAACATATTATAGATATTCTTGAACAATATAAAGATAATCGTCAGTTTAT AGTTATGACACATTCACCAACTTTAACAAAATGTATAAAAGATTTAGATAACGATAATGAAAATAGAGTTTATGTTTTGG ATAATGGTAAAAATATATCTACATCAAAAACTAAGCAGATAGAGCATTTAGTTGGAGATTTTTGGAACTCACAAGAACAG ACAGTTTTTTTGTCAAGCCATAAAAATATGGTTTTACTTGTTGAAGGTAAGCACGATAAAGAACATATTATAAATGCTTG GAAACATTATAAAAATGATTATCCAACTTTAGATTTTGATGTTTTTAGTATGGACTGTGCAGAAAATATAAGTCAACTAT TAACAGGTCTAAGAACATCTGAATTTCAAGATAGGAAAAAATATGTTGGTATTTTTGATAATGATGAGGCAGGTATAAAT GCTTGTAATCATACTCAAGTTAAGTACTTAAAAAATAAGCAGTCTAAAAAATGTAAGAATAAGTTTTTTGCTATCACTTA TTCTAAACCAGAAAACTATAAAGAAAAACATTGGACAGTAGAAAGTCTTTTGCCCCTAAATAAATATGAAAGTATTTATA AGAAAGCAATTGAAACACATAGTTTTGAAGCAAAGAAAATAGATGATATTTCTCATGATATTCAAAAAAGAGTAAAAGGA ATGTTGGCGGATGAAAGTAAAAACTATTCAAAACAAGATCTCATCGAATTTAAAAAAATATTTGATATTTTGAATGAAAT AAATAATATTGGCAAACAGCCACAGCCACAAGATATTTCTAATAAAGAAGATCATATAAAACAAAAAGTTAAAGAAAAAA ATGAAGCCTTTCGTATAGGTAATTTAATTACAGAGATTACAGATGCAAAAACCTATGAAGAGAGTTTTATACCTATATAT GGAAGTTATAAAAACAAAGTTATTGAAGCAAAGTATGATTTAAATTCTAAAAAGGTTGTTTATAATGACTTGGTTGGTTC ACCAAGTGCTATGGCAAATCAAGCTGTTTGGGATATGGGGGCGCCTAAAACAAGCACTAGAAACGGTTTAACCTTTTGGA AGTATGAAAAAGGAAGAGACTTAAAAGATCTACATGAGAAAATATGA
Upstream 100 bases:
>100_bases TAAAAATAGAAAAAATTAACAAAATAAAAATAGAGTTTAATAAAAAAGATATAAAAGCTGGGAAATTAGCCAAACTAAAG AATTTATTAAACTAATAGAT
Downstream 100 bases:
>100_bases TATCTAAATCTTAAAAGTTTTAGAATAAATCCATCTGTTTATCATCAATCTCCCCAAGTTTTACACCTATACCAATTAGT CGAATAGGGTGATTTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKEGYSLEELRRILEVYPSNEVFEYFYNALLSEMITDIQIFFNDDNLTIGDLSEGEKKLLLLKAAFEFVAQEDSLFMLDE PDSHIHLDNKKHIIDILEQYKDNRQFIVMTHSPTLTKCIKDLDNDNENRVYVLDNGKNISTSKTKQIEHLVGDFWNSQEQ TVFLSSHKNMVLLVEGKHDKEHIINAWKHYKNDYPTLDFDVFSMDCAENISQLLTGLRTSEFQDRKKYVGIFDNDEAGIN ACNHTQVKYLKNKQSKKCKNKFFAITYSKPENYKEKHWTVESLLPLNKYESIYKKAIETHSFEAKKIDDISHDIQKRVKG MLADESKNYSKQDLIEFKKIFDILNEINNIGKQPQPQDISNKEDHIKQKVKEKNEAFRIGNLITEITDAKTYEESFIPIY GSYKNKVIEAKYDLNSKKVVYNDLVGSPSAMANQAVWDMGAPKTSTRNGLTFWKYEKGRDLKDLHEKI
Sequences:
>Translated_468_residues MKEGYSLEELRRILEVYPSNEVFEYFYNALLSEMITDIQIFFNDDNLTIGDLSEGEKKLLLLKAAFEFVAQEDSLFMLDE PDSHIHLDNKKHIIDILEQYKDNRQFIVMTHSPTLTKCIKDLDNDNENRVYVLDNGKNISTSKTKQIEHLVGDFWNSQEQ TVFLSSHKNMVLLVEGKHDKEHIINAWKHYKNDYPTLDFDVFSMDCAENISQLLTGLRTSEFQDRKKYVGIFDNDEAGIN ACNHTQVKYLKNKQSKKCKNKFFAITYSKPENYKEKHWTVESLLPLNKYESIYKKAIETHSFEAKKIDDISHDIQKRVKG MLADESKNYSKQDLIEFKKIFDILNEINNIGKQPQPQDISNKEDHIKQKVKEKNEAFRIGNLITEITDAKTYEESFIPIY GSYKNKVIEAKYDLNSKKVVYNDLVGSPSAMANQAVWDMGAPKTSTRNGLTFWKYEKGRDLKDLHEKI >Mature_468_residues MKEGYSLEELRRILEVYPSNEVFEYFYNALLSEMITDIQIFFNDDNLTIGDLSEGEKKLLLLKAAFEFVAQEDSLFMLDE PDSHIHLDNKKHIIDILEQYKDNRQFIVMTHSPTLTKCIKDLDNDNENRVYVLDNGKNISTSKTKQIEHLVGDFWNSQEQ TVFLSSHKNMVLLVEGKHDKEHIINAWKHYKNDYPTLDFDVFSMDCAENISQLLTGLRTSEFQDRKKYVGIFDNDEAGIN ACNHTQVKYLKNKQSKKCKNKFFAITYSKPENYKEKHWTVESLLPLNKYESIYKKAIETHSFEAKKIDDISHDIQKRVKG MLADESKNYSKQDLIEFKKIFDILNEINNIGKQPQPQDISNKEDHIKQKVKEKNEAFRIGNLITEITDAKTYEESFIPIY GSYKNKVIEAKYDLNSKKVVYNDLVGSPSAMANQAVWDMGAPKTSTRNGLTFWKYEKGRDLKDLHEKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54645; Mature: 54645
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEGYSLEELRRILEVYPSNEVFEYFYNALLSEMITDIQIFFNDDNLTIGDLSEGEKKLL CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCCCHHHH LLKAAFEFVAQEDSLFMLDEPDSHIHLDNKKHIIDILEQYKDNRQFIVMTHSPTLTKCIK HHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH DLDNDNENRVYVLDNGKNISTSKTKQIEHLVGDFWNSQEQTVFLSSHKNMVLLVEGKHDK HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCH EHIINAWKHYKNDYPTLDFDVFSMDCAENISQLLTGLRTSEFQDRKKYVGIFDNDEAGIN HHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECEECCCCCCCC ACNHTQVKYLKNKQSKKCKNKFFAITYSKPENYKEKHWTVESLLPLNKYESIYKKAIETH CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHC SFEAKKIDDISHDIQKRVKGMLADESKNYSKQDLIEFKKIFDILNEINNIGKQPQPQDIS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NKEDHIKQKVKEKNEAFRIGNLITEITDAKTYEESFIPIYGSYKNKVIEAKYDLNSKKVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEEEEECCCCCEEE YNDLVGSPSAMANQAVWDMGAPKTSTRNGLTFWKYEKGRDLKDLHEKI EHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHCC >Mature Secondary Structure MKEGYSLEELRRILEVYPSNEVFEYFYNALLSEMITDIQIFFNDDNLTIGDLSEGEKKLL CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEECCCCEEECCCCCCCHHHH LLKAAFEFVAQEDSLFMLDEPDSHIHLDNKKHIIDILEQYKDNRQFIVMTHSPTLTKCIK HHHHHHHHHHCCCCEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH DLDNDNENRVYVLDNGKNISTSKTKQIEHLVGDFWNSQEQTVFLSSHKNMVLLVEGKHDK HHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCH EHIINAWKHYKNDYPTLDFDVFSMDCAENISQLLTGLRTSEFQDRKKYVGIFDNDEAGIN HHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECEECCCCCCCC ACNHTQVKYLKNKQSKKCKNKFFAITYSKPENYKEKHWTVESLLPLNKYESIYKKAIETH CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHHC SFEAKKIDDISHDIQKRVKGMLADESKNYSKQDLIEFKKIFDILNEINNIGKQPQPQDIS CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NKEDHIKQKVKEKNEAFRIGNLITEITDAKTYEESFIPIYGSYKNKVIEAKYDLNSKKVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEEEEECCCCCEEE YNDLVGSPSAMANQAVWDMGAPKTSTRNGLTFWKYEKGRDLKDLHEKI EHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA