Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256303

Identifier: 89256303

GI number: 89256303

Start: 922930

End: 923205

Strand: Reverse

Name: 89256303

Synonym: FTL_0954

Alternate gene names: NA

Gene position: 923205-922930 (Counterclockwise)

Preceding gene: 89256304

Following gene: 89256302

Centisome position: 48.69

GC content: 28.26

Gene sequence:

>276_bases
ATGTCTAAAATAATTAATAATTGTCTTATATGGTTATCAGTGCTAAGTATAGTTGGTTGTAATACTTCATTTACTTATCC
TAATTATCAACTAAGTGGTACATACTACAATCCAGACTATAATAAAGATGACTTAATTCATGGCTACTTTCAACAAAGTG
TTGAACAGATGGAAACTAGCCCATATACCTATCAAGGTCAATATTATGAAGAAACTGGATTTACTCAACCAAATCCATTT
ATGCAAAATATTAATTGGAATAGAATGAATGTTTAA

Upstream 100 bases:

>100_bases
CCAAAGAAGCAGGTAAAGCTCGTCTTGAAGGTAAAGAATACATCATGAAAGATGGGGATGTAGTTAACTTTAGATTTAAT
GTATAGTCAAACTTTCAAAA

Downstream 100 bases:

>100_bases
AAAATTTCGTTTTATCTTATTAAATGTAAAAATATAGACCTAATGTGACAGTTACCTGCTTTAGGACAAGGATTTACTGT
CAGTTTAGATTGAGCTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MSKIINNCLIWLSVLSIVGCNTSFTYPNYQLSGTYYNPDYNKDDLIHGYFQQSVEQMETSPYTYQGQYYEETGFTQPNPF
MQNINWNRMNV

Sequences:

>Translated_91_residues
MSKIINNCLIWLSVLSIVGCNTSFTYPNYQLSGTYYNPDYNKDDLIHGYFQQSVEQMETSPYTYQGQYYEETGFTQPNPF
MQNINWNRMNV
>Mature_90_residues
SKIINNCLIWLSVLSIVGCNTSFTYPNYQLSGTYYNPDYNKDDLIHGYFQQSVEQMETSPYTYQGQYYEETGFTQPNPFM
QNINWNRMNV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10763; Mature: 10632

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIINNCLIWLSVLSIVGCNTSFTYPNYQLSGTYYNPDYNKDDLIHGYFQQSVEQMETS
CHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHCC
PYTYQGQYYEETGFTQPNPFMQNINWNRMNV
CCEECCCEECCCCCCCCCCHHHCCCCEECCC
>Mature Secondary Structure 
SKIINNCLIWLSVLSIVGCNTSFTYPNYQLSGTYYNPDYNKDDLIHGYFQQSVEQMETS
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHCC
PYTYQGQYYEETGFTQPNPFMQNINWNRMNV
CCEECCCEECCCCCCCCCCHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA