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The map label for this gene is yafE [H]

Identifier: 89256302

GI number: 89256302

Start: 921901

End: 922347

Strand: Reverse

Name: yafE [H]

Synonym: FTL_0953

Alternate gene names: 89256302

Gene position: 922347-921901 (Counterclockwise)

Preceding gene: 89256303

Following gene: 89256301

Centisome position: 48.65

GC content: 26.85

Gene sequence:

>447_bases
ATGATATATAATACAATTAGATTAACTGATGATACAATTTTAGATGAAAAAGAAAATATAGACATAATCTCCAAACAATT
TGGTAATTCTGCAAATGATTACTTATTAAGTAAAGATCACTCTACAGGTAATGATTTAGAAAAACTGGCAAATTTTTTAG
ATTCTCAGAGTAAGATCATCAATCAAAGTATAGATATAGGATGTGGTGCAGGTCATATTAGTTATATACTTAGTCGATAT
TCAGAACAGGTTTATGCCTTTGATTTATTAGCTGAAATGCTTGAAGTAGTTAAAAATGAAGCTCATAATAGGCAATTAAA
AAATATTGAAATTAAACAAGGAAATATAGAATCTATACCTTTTAATGATAACTCATTTGATCTAGCAATAAGTAGATTTA
GTGCTCATCATTGGGATGATGTCTTAAAGAAGTATATAGAATCCTAA

Upstream 100 bases:

>100_bases
TATCGAAAGTATATTACAAGAGATTCTCGTTACGTCTAGAAAACTCCTAACTATATTTAGACGCTATGTTAAACCATTGT
CTAAAAGAATATAAGACTAT

Downstream 100 bases:

>100_bases
AAGATTCAGGAGAAGCTATATTTATAGATGTTATAGCTCCAAACGATGCTAAACAGGATACTTGGCTTCAGACTATTGAA
TATCTTAGAGATCCATCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MIYNTIRLTDDTILDEKENIDIISKQFGNSANDYLLSKDHSTGNDLEKLANFLDSQSKIINQSIDIGCGAGHISYILSRY
SEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIPFNDNSFDLAISRFSAHHWDDVLKKYIES

Sequences:

>Translated_148_residues
MIYNTIRLTDDTILDEKENIDIISKQFGNSANDYLLSKDHSTGNDLEKLANFLDSQSKIINQSIDIGCGAGHISYILSRY
SEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIPFNDNSFDLAISRFSAHHWDDVLKKYIES
>Mature_148_residues
MIYNTIRLTDDTILDEKENIDIISKQFGNSANDYLLSKDHSTGNDLEKLANFLDSQSKIINQSIDIGCGAGHISYILSRY
SEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIPFNDNSFDLAISRFSAHHWDDVLKKYIES

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=75, Percent_Identity=50.6666666666667, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 16915; Mature: 16915

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYNTIRLTDDTILDEKENIDIISKQFGNSANDYLLSKDHSTGNDLEKLANFLDSQSKII
CCCCEEEECCCHHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
NQSIDIGCGAGHISYILSRYSEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCCC
FNDNSFDLAISRFSAHHWDDVLKKYIES
CCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYNTIRLTDDTILDEKENIDIISKQFGNSANDYLLSKDHSTGNDLEKLANFLDSQSKII
CCCCEEEECCCHHHCCCCCCHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
NQSIDIGCGAGHISYILSRYSEQVYAFDLLAEMLEVVKNEAHNRQLKNIEIKQGNIESIP
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCEEEECCCCCCCC
FNDNSFDLAISRFSAHHWDDVLKKYIES
CCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]