| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yjjL [C]
Identifier: 89256296
GI number: 89256296
Start: 914886
End: 915884
Strand: Direct
Name: yjjL [C]
Synonym: FTL_0946
Alternate gene names: 89256296
Gene position: 914886-915884 (Clockwise)
Preceding gene: 89256294
Following gene: 89256298
Centisome position: 48.25
GC content: 30.63
Gene sequence:
>999_bases GTGTATTGCTGCAATTTTTATGGGTTAGATTATTTTCAACATACTGCACCAAGTGTTTTAGTTAAGCCAATAGCCGCAAC TATGCAGGTAGGAATAGAAGATATTGCTTATATTATGAGTATATATTTTCCTATTTATGCAATATCACAAGTTCCAGCTG GAATTCTACTTGATAAGTACGGCTCAAAAATAATGTTATCAATTTCATGCTTAGTTATGAGTTTAGGCATATTACTGTTT AGTTATGATCCAAATTTAGTAACAATGTTTATCGGTAGAATACTTATAGCTGCAGTAGCTTTTATTGGCACACTGAAAGT GGCTGCTGATGTCTTACCTGAAAGAGCATTTCCAATTGCTGTAGGTCTGACAAATACTATAGGAGTTTTAGGTAGGATAT TTGGACAAATATTTTTGAATTACCTTGTTATTCTGCATGGCTGGCAGTTTGCTTTAGTATTGATAGGATATTTTGGTATA TTTTGGAGTATCATAATTATAGTTCTATTAAAGTCTCCAAATATTGATAATACAAGTATCAATAATTATAAGTTTAAATA TTTAAGTTTTGCCCAAAGTTTAAAATTATTATTAAATAAAAAACTTTGGTTTTTAGCACTTTATGCTGGTTTAATGGTTG GTATAGTAGTCAATTCTTTTTCTGAGTTATATGATGTTCTATTTTTAGAGCAAGCGTATGATCTATCACAGCATCTAGCA GCTAAAGTAAGTGTAATGATGTTTATAGGTATAGCAGTTGGAGGTCCTTCCTATGGCTTCATTGCTAGCTTATTTGGTGA GAAAAGAATATGGATGTTAGTTTGTAATATTATGACAATACTAGCATTTTCAGTAGTTATAATTTTTGCTGATTTTATTT CAGTAGATAATTTATACATAATTTTCTTTGTTATTGGTTTTAGTGTATCGAGTATGCTTTTAGTGTTTTCAGTGGTTGAG GAAATATTTCCACCGCACAGATTAAGGTTACTGCATTAG
Upstream 100 bases:
>100_bases ATTTTCTATATCCTATATACTTATTGATTAGATACTATTTTATATGTTAATACAATATGAAGTCTACAAAATATAGTCTA GTCATAGGTTGGAGTATTTG
Downstream 100 bases:
>100_bases CAATTGTTAATATGGTTATAGGGCTGTGTGGAGCTATTTTTCAATATTTGATTAGTTATATTAGCGTTTATTTAAATGGC GGACCTTTGACCGGAGAGAT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Transporter MFS Superfamily; Facilitator Family Transporter Transporter; Sugar Phosphate Permease; Sugar Transporter; Permease; Facilitator Membrane Proteins; Intraphagosomal Amino Acid Transporter Family Protein; Transport Proteins; Multidrug ABC Transporter; Facilitator Superfamily Sugar Transporter; NasA Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MYCCNFYGLDYFQHTAPSVLVKPIAATMQVGIEDIAYIMSIYFPIYAISQVPAGILLDKYGSKIMLSISCLVMSLGILLF SYDPNLVTMFIGRILIAAVAFIGTLKVAADVLPERAFPIAVGLTNTIGVLGRIFGQIFLNYLVILHGWQFALVLIGYFGI FWSIIIIVLLKSPNIDNTSINNYKFKYLSFAQSLKLLLNKKLWFLALYAGLMVGIVVNSFSELYDVLFLEQAYDLSQHLA AKVSVMMFIGIAVGGPSYGFIASLFGEKRIWMLVCNIMTILAFSVVIIFADFISVDNLYIIFFVIGFSVSSMLLVFSVVE EIFPPHRLRLLH
Sequences:
>Translated_332_residues MYCCNFYGLDYFQHTAPSVLVKPIAATMQVGIEDIAYIMSIYFPIYAISQVPAGILLDKYGSKIMLSISCLVMSLGILLF SYDPNLVTMFIGRILIAAVAFIGTLKVAADVLPERAFPIAVGLTNTIGVLGRIFGQIFLNYLVILHGWQFALVLIGYFGI FWSIIIIVLLKSPNIDNTSINNYKFKYLSFAQSLKLLLNKKLWFLALYAGLMVGIVVNSFSELYDVLFLEQAYDLSQHLA AKVSVMMFIGIAVGGPSYGFIASLFGEKRIWMLVCNIMTILAFSVVIIFADFISVDNLYIIFFVIGFSVSSMLLVFSVVE EIFPPHRLRLLH >Mature_332_residues MYCCNFYGLDYFQHTAPSVLVKPIAATMQVGIEDIAYIMSIYFPIYAISQVPAGILLDKYGSKIMLSISCLVMSLGILLF SYDPNLVTMFIGRILIAAVAFIGTLKVAADVLPERAFPIAVGLTNTIGVLGRIFGQIFLNYLVILHGWQFALVLIGYFGI FWSIIIIVLLKSPNIDNTSINNYKFKYLSFAQSLKLLLNKKLWFLALYAGLMVGIVVNSFSELYDVLFLEQAYDLSQHLA AKVSVMMFIGIAVGGPSYGFIASLFGEKRIWMLVCNIMTILAFSVVIIFADFISVDNLYIIFFVIGFSVSSMLLVFSVVE EIFPPHRLRLLH
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37089; Mature: 37089
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYCCNFYGLDYFQHTAPSVLVKPIAATMQVGIEDIAYIMSIYFPIYAISQVPAGILLDKY CEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GSKIMLSISCLVMSLGILLFSYDPNLVTMFIGRILIAAVAFIGTLKVAADVLPERAFPIA CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VGLTNTIGVLGRIFGQIFLNYLVILHGWQFALVLIGYFGIFWSIIIIVLLKSPNIDNTSI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NNYKFKYLSFAQSLKLLLNKKLWFLALYAGLMVGIVVNSFSELYDVLFLEQAYDLSQHLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVSVMMFIGIAVGGPSYGFIASLFGEKRIWMLVCNIMTILAFSVVIIFADFISVDNLYI HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IFFVIGFSVSSMLLVFSVVEEIFPPHRLRLLH HHHHHHHHHHHHHHHHHHHHHHCCCHHEEECC >Mature Secondary Structure MYCCNFYGLDYFQHTAPSVLVKPIAATMQVGIEDIAYIMSIYFPIYAISQVPAGILLDKY CEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHC GSKIMLSISCLVMSLGILLFSYDPNLVTMFIGRILIAAVAFIGTLKVAADVLPERAFPIA CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VGLTNTIGVLGRIFGQIFLNYLVILHGWQFALVLIGYFGIFWSIIIIVLLKSPNIDNTSI EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC NNYKFKYLSFAQSLKLLLNKKLWFLALYAGLMVGIVVNSFSELYDVLFLEQAYDLSQHLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVSVMMFIGIAVGGPSYGFIASLFGEKRIWMLVCNIMTILAFSVVIIFADFISVDNLYI HHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IFFVIGFSVSSMLLVFSVVEEIFPPHRLRLLH HHHHHHHHHHHHHHHHHHHHHHCCCHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA