| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is kefB [H]
Identifier: 89256294
GI number: 89256294
Start: 912557
End: 913732
Strand: Direct
Name: kefB [H]
Synonym: FTL_0943
Alternate gene names: 89256294
Gene position: 912557-913732 (Clockwise)
Preceding gene: 89256293
Following gene: 89256296
Centisome position: 48.13
GC content: 32.4
Gene sequence:
>1176_bases ATGCACAACGAGTCTTTGATTTCCATTTTCGTTTTTGTAATGCTGGGCATTCTAGTAGTTACAATAGTCCTAAAAAAACT AAAACAACCATATGTTGTAGCATATTTATTGACAGGAATATTATTAGGACCGTATGGATTAAGATTGATTCAAGATCAAG AGAATCTTGCAAGGTTAGGTGAAATAGGGGTTATCCTATTATTATTTTTTGCAGGGATGGAAGTCTCACCACGTAAATTT GCTGAAAACTGGCAAGTTCCGACTATTGGTACAATGCTGCAAATGCTAATAACAAGTCTAATAGTTTCTATAATTGGAGT AGCATTAGGATGGAGTATTGCAAAGATATTACTTTTTGGAGCGGTTATTAGCTTAAGTAGTACAGCTGTTGTGCTTAAAT TATTAAATGATAGTGGCAGTATGAAGACTCGTCTAGGGCAAAATGTTTTAGGAATTCTTTTAATCCAAGATTTAGCAGTA GTGCCTATGCTTATTCTTGTAAGATTAATCGGAGGCGAGGAGCTATCAATAAGTCAAATAGTAACTCAAATTTTAGGTGG TATTCTTGTAATATCTATAGCAGCCATTATGGCGGTTAAAAAGAATATCAAAATATCTTTTATTTCTGTGTTGGGAAAGG ACGAGGAAATGAGAGTTTTTGCAGCTCTAGTAATTTGTTTTGGGATGGCAGCACTTACAGAATCATTAGAATTATCATCT GCTCTGGGTGCATTTGTAGGGGGGATAATCGTTTCTACACTTGAAGAAACAGAGTGGGTTGGACATAGTCTCTCAACTGT TAAGACTATTTTTATGGCATTATTTTTTATATCTGTAGGAATGTTGATAGATTTAAAATTATTTTGGAATCATATATTTT TATTTATGGCATTATTGCTATTGATATATTCACTGAATACAACTATCAATGCTTTAATATTTAAAGCACTTAGACAGAGA ACAGAAGAAGCATTGATAGGTGGAGCGATGTTATCACAAATAGGAGAGTTTAGCTTTGTATTGATTTCTATGGGTTTTGC ATCAGGAATTTTAAGTTTAACAATATATCATTATTGTATTACGTTGATATCTTTATCGTTATTGTTTAGTCCATTATGGA TTAGTGGTGTTAATCTCTATATTAAAAAGTATATTAAGAAAAAGCCTCAGAATTAA
Upstream 100 bases:
>100_bases TAATTTATACAATAAATAATTTAGAGAGAATTAATAATCTTAGTATAATTTGTTTAATATATGCAGTATTATTACTGTAG TTATTTTATGATGTAAAGAT
Downstream 100 bases:
>100_bases TTATGTTAATAAGTTCTCGTGTATAGGCTTGTTCAATCTCTTTTCTATGCTCAACATAACAGTAGAAATTAGCTTGGATG TTTATAACATTTTCTTTATC
Product: Sodium/hydrogen exchanger family protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MHNESLISIFVFVMLGILVVTIVLKKLKQPYVVAYLLTGILLGPYGLRLIQDQENLARLGEIGVILLLFFAGMEVSPRKF AENWQVPTIGTMLQMLITSLIVSIIGVALGWSIAKILLFGAVISLSSTAVVLKLLNDSGSMKTRLGQNVLGILLIQDLAV VPMLILVRLIGGEELSISQIVTQILGGILVISIAAIMAVKKNIKISFISVLGKDEEMRVFAALVICFGMAALTESLELSS ALGAFVGGIIVSTLEETEWVGHSLSTVKTIFMALFFISVGMLIDLKLFWNHIFLFMALLLLIYSLNTTINALIFKALRQR TEEALIGGAMLSQIGEFSFVLISMGFASGILSLTIYHYCITLISLSLLFSPLWISGVNLYIKKYIKKKPQN
Sequences:
>Translated_391_residues MHNESLISIFVFVMLGILVVTIVLKKLKQPYVVAYLLTGILLGPYGLRLIQDQENLARLGEIGVILLLFFAGMEVSPRKF AENWQVPTIGTMLQMLITSLIVSIIGVALGWSIAKILLFGAVISLSSTAVVLKLLNDSGSMKTRLGQNVLGILLIQDLAV VPMLILVRLIGGEELSISQIVTQILGGILVISIAAIMAVKKNIKISFISVLGKDEEMRVFAALVICFGMAALTESLELSS ALGAFVGGIIVSTLEETEWVGHSLSTVKTIFMALFFISVGMLIDLKLFWNHIFLFMALLLLIYSLNTTINALIFKALRQR TEEALIGGAMLSQIGEFSFVLISMGFASGILSLTIYHYCITLISLSLLFSPLWISGVNLYIKKYIKKKPQN >Mature_391_residues MHNESLISIFVFVMLGILVVTIVLKKLKQPYVVAYLLTGILLGPYGLRLIQDQENLARLGEIGVILLLFFAGMEVSPRKF AENWQVPTIGTMLQMLITSLIVSIIGVALGWSIAKILLFGAVISLSSTAVVLKLLNDSGSMKTRLGQNVLGILLIQDLAV VPMLILVRLIGGEELSISQIVTQILGGILVISIAAIMAVKKNIKISFISVLGKDEEMRVFAALVICFGMAALTESLELSS ALGAFVGGIIVSTLEETEWVGHSLSTVKTIFMALFFISVGMLIDLKLFWNHIFLFMALLLLIYSLNTTINALIFKALRQR TEEALIGGAMLSQIGEFSFVLISMGFASGILSLTIYHYCITLISLSLLFSPLWISGVNLYIKKYIKKKPQN
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=381, Percent_Identity=26.246719160105, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1786232, Length=384, Percent_Identity=26.8229166666667, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1789749, Length=362, Percent_Identity=27.9005524861878, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1786685, Length=391, Percent_Identity=27.1099744245524, Blast_Score=115, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 42761; Mature: 42761
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNESLISIFVFVMLGILVVTIVLKKLKQPYVVAYLLTGILLGPYGLRLIQDQENLARLG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EIGVILLLFFAGMEVSPRKFAENWQVPTIGTMLQMLITSLIVSIIGVALGWSIAKILLFG HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVISLSSTAVVLKLLNDSGSMKTRLGQNVLGILLIQDLAVVPMLILVRLIGGEELSISQI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VTQILGGILVISIAAIMAVKKNIKISFISVLGKDEEMRVFAALVICFGMAALTESLELSS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALGAFVGGIIVSTLEETEWVGHSLSTVKTIFMALFFISVGMLIDLKLFWNHIFLFMALLL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYSLNTTINALIFKALRQRTEEALIGGAMLSQIGEFSFVLISMGFASGILSLTIYHYCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLISLSLLFSPLWISGVNLYIKKYIKKKPQN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHNESLISIFVFVMLGILVVTIVLKKLKQPYVVAYLLTGILLGPYGLRLIQDQENLARLG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH EIGVILLLFFAGMEVSPRKFAENWQVPTIGTMLQMLITSLIVSIIGVALGWSIAKILLFG HHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVISLSSTAVVLKLLNDSGSMKTRLGQNVLGILLIQDLAVVPMLILVRLIGGEELSISQI HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VTQILGGILVISIAAIMAVKKNIKISFISVLGKDEEMRVFAALVICFGMAALTESLELSS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALGAFVGGIIVSTLEETEWVGHSLSTVKTIFMALFFISVGMLIDLKLFWNHIFLFMALLL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYSLNTTINALIFKALRQRTEEALIGGAMLSQIGEFSFVLISMGFASGILSLTIYHYCI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLISLSLLFSPLWISGVNLYIKKYIKKKPQN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA