Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256271
Identifier: 89256271
GI number: 89256271
Start: 895159
End: 895590
Strand: Reverse
Name: 89256271
Synonym: FTL_0920
Alternate gene names: NA
Gene position: 895590-895159 (Counterclockwise)
Preceding gene: 89256272
Following gene: 89256270
Centisome position: 47.24
GC content: 31.25
Gene sequence:
>432_bases ATGATCCTCTCTCAAGATAGATATCAGTTACGCAAACTTTTTATCGATAGCTGGAATAAGTTTGTCAACAACACACCTTT AACTGCTCTAGAAGAGCAAATAGTTAGGATTATAGAGCTACATCCAGAGTACCATAAACAAATTACACTTGAAAATATTG ATAAAGACTACTTACCGGAAGTTGGGCAAATAAATCCTTTCTTGCATATAAGCTTACATTTAGCGATTATTGAACAAATT CAAACAAATCGTCCATTTTGTATAAGCAATGTATATCAACAGCTTCTAGGCAAATATAATAATGATGAACATAAAGTACA CCATATTATGATAGACTATCTTGCAGAAGAAATGTGGAAATCACAAAAATATAATACTCTCCCAGACGAACAAAACTATT TAACCAAACTACAAGAGTTAACACTTATATAA
Upstream 100 bases:
>100_bases TAATATTACATGGTCGCTATATCTGTACTGCACAAAGACCAAGGTGTCGTAACTGTATAATTTATGACTACTGTGAATTT AAAGATAAGGAAAAATATCG
Downstream 100 bases:
>100_bases TGAGAAATTCTATAAAAATTTCAAAAGTAAATATTAATTTTAATCAGCCTAAAGGTTTACATATCATTGCTTTTATGATT TTTTGCCTATGTTTATGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MILSQDRYQLRKLFIDSWNKFVNNTPLTALEEQIVRIIELHPEYHKQITLENIDKDYLPEVGQINPFLHISLHLAIIEQI QTNRPFCISNVYQQLLGKYNNDEHKVHHIMIDYLAEEMWKSQKYNTLPDEQNYLTKLQELTLI
Sequences:
>Translated_143_residues MILSQDRYQLRKLFIDSWNKFVNNTPLTALEEQIVRIIELHPEYHKQITLENIDKDYLPEVGQINPFLHISLHLAIIEQI QTNRPFCISNVYQQLLGKYNNDEHKVHHIMIDYLAEEMWKSQKYNTLPDEQNYLTKLQELTLI >Mature_143_residues MILSQDRYQLRKLFIDSWNKFVNNTPLTALEEQIVRIIELHPEYHKQITLENIDKDYLPEVGQINPFLHISLHLAIIEQI QTNRPFCISNVYQQLLGKYNNDEHKVHHIMIDYLAEEMWKSQKYNTLPDEQNYLTKLQELTLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17177; Mature: 17177
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSQDRYQLRKLFIDSWNKFVNNTPLTALEEQIVRIIELHPEYHKQITLENIDKDYLPE CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHCCC VGQINPFLHISLHLAIIEQIQTNRPFCISNVYQQLLGKYNNDEHKVHHIMIDYLAEEMWK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SQKYNTLPDEQNYLTKLQELTLI HCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MILSQDRYQLRKLFIDSWNKFVNNTPLTALEEQIVRIIELHPEYHKQITLENIDKDYLPE CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHCCC VGQINPFLHISLHLAIIEQIQTNRPFCISNVYQQLLGKYNNDEHKVHHIMIDYLAEEMWK CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SQKYNTLPDEQNYLTKLQELTLI HCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA