| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yqhT [H]
Identifier: 89256235
GI number: 89256235
Start: 854379
End: 856172
Strand: Direct
Name: yqhT [H]
Synonym: FTL_0877
Alternate gene names: 89256235
Gene position: 854379-856172 (Clockwise)
Preceding gene: 89256234
Following gene: 89256236
Centisome position: 45.06
GC content: 34.62
Gene sequence:
>1794_bases ATGTCTGAGAAATTACAAATCTTAAGAAGTTTAATGCAAGAAAAAGATTATGATTTTTATATAGTGCCTTCTGTTGATGA TCATAACAACGAATATGTCCCTAAGTGTTGGCAATACCGTGCTTGGATAAGTGGTTTCGATGGTTCAGCCGGAGATGTGC TAGTATGTATGGATAAAGCATATCTTTCTACTGATGGTAGGTATTTTCTCCAAGCTGAACAACAGTTAGACAAAAATGAT TTCGAACTAATAAAGCAGTCAAGTTTTGCACCTGAAATAGTCAAATGGCTGTGGAAAAATACTAAGGGAAAAACTATCGC GGTAGACCCAGCTAAACTTAGTTACAAAAGTACTTTAGAGTTGTTGGATTATCTTAATAGTAATGATTACAATGTTGTTT TTGATCAAGATAACCTTGTGCATAAAGCCCAACAAATGCTAAGCCAAGTAGTCGACGTTCCATGTACTACAATACAAGAG CATGCTATTCAATATTCTGGTAGAAGCGTTGCCTCTAAAATTGAAGAGCTAAGACGCACAATGAAACAGACAAGGTCGGA TTTCTATGTTGATTCAAAACTGGATCATATAGCATGGTTACTAAATATTAGAGCTAGGGATGTTGAATGTACACCTTTAG TAATAAGTTATTTATTTGTTTCTCTTGATAAGATAATTCTATATGTTGATGATAGAAAAATTACTCCAGCAATAAAAAAA TATTTTGATGATAATCATATTCAAACTAGGGATTATTATCAATTTTATCAAGACTTAGAGGCAACTACAGGTAAATATTT ATTAGATGGTGCTAATATCAACTATAAAGTTCCACTAAGTATTAACAAAAATCAAAATAGCAGCTGCTATTTCTTAATGA TTGACTCTCCAGTAGGTTTGAGTAAAGCTCTAAAAAATCCTGTTGAAATTAACGGTTCAAAAGAGGCTCATCGTAAAGAT GCCGCAGCATTTATATCATGGTGGCATTGGATCGAGAATAACTATCAAGGAGTTGATGAGATCGAAGCCGCGGCTAAGTT AAGAGAGTTTCGTGCCCAACAACAAGGCTACGTTGAGGATAGTTTTTCATACATAGTAGGGCATGCAGCAAATGGTGCAA TTATTCATTATATGGCAAAAAAAGATGCCAATCTGAAAAAGATTGATGACCAAGCGCCTCTTTTATGTGATTCTGGAGGG CAGTACAGAGAGGGAACTACAGATATTACTAGAGTACTTCACTTTGGTAAACCATCAAAAGAGCATAGAAAATACTATAC TTTAGTTCTAAAAGGTCATTTAGGGCTTGGCAGGGCAGTATTTCCTAAAGGTACTACAGGCTCACAACTTGATGTTTTAG CACGCGAGCATTTATGGCATTTTTGTGCTGATTATGCGCATGGAACAGGTCATGGTGTAGGAAGTTTCCTAGGAGTACAT GAAGGACCACAACGTATTAATTCAGTTTCAAAAGTTGAGCTAATGCCAGGGATGATCTTAAGTAATGAACCAGGAGCATA TTTTCCAGGTGAGTTTGGTATTAGAATAGAAAATTTATGCTATATCAAACAGCGTAATCAAGAATCTCCTACAGGTCATG GACCATTTTATTGTTTTGAAGATTTAACTTTGGTGCCTTATGAATATAAGCTAATCGAAACTTGGATGCTAACTTATACT GAAAAGAAAACTATAAATAATTACTATAGTAGGATTAGAAAAGAGGTATTACCTTTGATAAATGATCCACAAGTTAGAGA ATTCTTATTATTCAAAACAAGACATATAAAATAG
Upstream 100 bases:
>100_bases CACTTATAGTAATAAAAGATTTTACTCTTATCGTAAAGAGGGTGTCACAGGTAGACAAGCCACTTTTGTATGGTTTGAAT AAATTTTAATAAGGAATAAT
Downstream 100 bases:
>100_bases TATTATCTTTATTATAAAAACAGTAAGAAATTCTTATTTTAAGAAAAAAGTTAATAGTTTTTAACTTTTTACAAAATAAA CTAAAAAGTATTTAAGCATG
Product: peptidase, M24 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MSEKLQILRSLMQEKDYDFYIVPSVDDHNNEYVPKCWQYRAWISGFDGSAGDVLVCMDKAYLSTDGRYFLQAEQQLDKND FELIKQSSFAPEIVKWLWKNTKGKTIAVDPAKLSYKSTLELLDYLNSNDYNVVFDQDNLVHKAQQMLSQVVDVPCTTIQE HAIQYSGRSVASKIEELRRTMKQTRSDFYVDSKLDHIAWLLNIRARDVECTPLVISYLFVSLDKIILYVDDRKITPAIKK YFDDNHIQTRDYYQFYQDLEATTGKYLLDGANINYKVPLSINKNQNSSCYFLMIDSPVGLSKALKNPVEINGSKEAHRKD AAAFISWWHWIENNYQGVDEIEAAAKLREFRAQQQGYVEDSFSYIVGHAANGAIIHYMAKKDANLKKIDDQAPLLCDSGG QYREGTTDITRVLHFGKPSKEHRKYYTLVLKGHLGLGRAVFPKGTTGSQLDVLAREHLWHFCADYAHGTGHGVGSFLGVH EGPQRINSVSKVELMPGMILSNEPGAYFPGEFGIRIENLCYIKQRNQESPTGHGPFYCFEDLTLVPYEYKLIETWMLTYT EKKTINNYYSRIRKEVLPLINDPQVREFLLFKTRHIK
Sequences:
>Translated_597_residues MSEKLQILRSLMQEKDYDFYIVPSVDDHNNEYVPKCWQYRAWISGFDGSAGDVLVCMDKAYLSTDGRYFLQAEQQLDKND FELIKQSSFAPEIVKWLWKNTKGKTIAVDPAKLSYKSTLELLDYLNSNDYNVVFDQDNLVHKAQQMLSQVVDVPCTTIQE HAIQYSGRSVASKIEELRRTMKQTRSDFYVDSKLDHIAWLLNIRARDVECTPLVISYLFVSLDKIILYVDDRKITPAIKK YFDDNHIQTRDYYQFYQDLEATTGKYLLDGANINYKVPLSINKNQNSSCYFLMIDSPVGLSKALKNPVEINGSKEAHRKD AAAFISWWHWIENNYQGVDEIEAAAKLREFRAQQQGYVEDSFSYIVGHAANGAIIHYMAKKDANLKKIDDQAPLLCDSGG QYREGTTDITRVLHFGKPSKEHRKYYTLVLKGHLGLGRAVFPKGTTGSQLDVLAREHLWHFCADYAHGTGHGVGSFLGVH EGPQRINSVSKVELMPGMILSNEPGAYFPGEFGIRIENLCYIKQRNQESPTGHGPFYCFEDLTLVPYEYKLIETWMLTYT EKKTINNYYSRIRKEVLPLINDPQVREFLLFKTRHIK >Mature_596_residues SEKLQILRSLMQEKDYDFYIVPSVDDHNNEYVPKCWQYRAWISGFDGSAGDVLVCMDKAYLSTDGRYFLQAEQQLDKNDF ELIKQSSFAPEIVKWLWKNTKGKTIAVDPAKLSYKSTLELLDYLNSNDYNVVFDQDNLVHKAQQMLSQVVDVPCTTIQEH AIQYSGRSVASKIEELRRTMKQTRSDFYVDSKLDHIAWLLNIRARDVECTPLVISYLFVSLDKIILYVDDRKITPAIKKY FDDNHIQTRDYYQFYQDLEATTGKYLLDGANINYKVPLSINKNQNSSCYFLMIDSPVGLSKALKNPVEINGSKEAHRKDA AAFISWWHWIENNYQGVDEIEAAAKLREFRAQQQGYVEDSFSYIVGHAANGAIIHYMAKKDANLKKIDDQAPLLCDSGGQ YREGTTDITRVLHFGKPSKEHRKYYTLVLKGHLGLGRAVFPKGTTGSQLDVLAREHLWHFCADYAHGTGHGVGSFLGVHE GPQRINSVSKVELMPGMILSNEPGAYFPGEFGIRIENLCYIKQRNQESPTGHGPFYCFEDLTLVPYEYKLIETWMLTYTE KKTINNYYSRIRKEVLPLINDPQVREFLLFKTRHIK
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI264681563, Length=598, Percent_Identity=37.4581939799331, Blast_Score=357, Evalue=2e-98, Organism=Homo sapiens, GI264681565, Length=598, Percent_Identity=36.2876254180602, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI93141226, Length=610, Percent_Identity=34.4262295081967, Blast_Score=307, Evalue=2e-83, Organism=Escherichia coli, GI1788728, Length=219, Percent_Identity=32.4200913242009, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17509539, Length=609, Percent_Identity=34.1543513957307, Blast_Score=301, Evalue=9e-82, Organism=Caenorhabditis elegans, GI25149105, Length=585, Percent_Identity=27.6923076923077, Blast_Score=208, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6322999, Length=639, Percent_Identity=35.5242566510172, Blast_Score=338, Evalue=2e-93, Organism=Drosophila melanogaster, GI17137632, Length=591, Percent_Identity=35.8714043993232, Blast_Score=328, Evalue=8e-90, Organism=Drosophila melanogaster, GI161078230, Length=623, Percent_Identity=29.5345104333868, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI21357287, Length=623, Percent_Identity=29.5345104333868, Blast_Score=251, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.-.- [C]
Molecular weight: Translated: 68760; Mature: 68629
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKLQILRSLMQEKDYDFYIVPSVDDHNNEYVPKCWQYRAWISGFDGSAGDVLVCMDKA CCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCH YLSTDGRYFLQAEQQLDKNDFELIKQSSFAPEIVKWLWKNTKGKTIAVDPAKLSYKSTLE HHCCCCCEEEEEHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCHHCCHHHHHH LLDYLNSNDYNVVFDQDNLVHKAQQMLSQVVDVPCTTIQEHAIQYSGRSVASKIEELRRT HHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH MKQTRSDFYVDSKLDHIAWLLNIRARDVECTPLVISYLFVSLDKIILYVDDRKITPAIKK HHHHHHCEEECCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHHH YFDDNHIQTRDYYQFYQDLEATTGKYLLDGANINYKVPLSINKNQNSSCYFLMIDSPVGL HCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCH SKALKNPVEINGSKEAHRKDAAAFISWWHWIENNYQGVDEIEAAAKLREFRAQQQGYVED HHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHC SFSYIVGHAANGAIIHYMAKKDANLKKIDDQAPLLCDSGGQYREGTTDITRVLHFGKPSK CHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCH EHRKYYTLVLKGHLGLGRAVFPKGTTGSQLDVLAREHLWHFCADYAHGTGHGVGSFLGVH HCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC EGPQRINSVSKVELMPGMILSNEPGAYFPGEFGIRIENLCYIKQRNQESPTGHGPFYCFE CCHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEC DLTLVPYEYKLIETWMLTYTEKKTINNYYSRIRKEVLPLINDPQVREFLLFKTRHIK CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SEKLQILRSLMQEKDYDFYIVPSVDDHNNEYVPKCWQYRAWISGFDGSAGDVLVCMDKA CHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCH YLSTDGRYFLQAEQQLDKNDFELIKQSSFAPEIVKWLWKNTKGKTIAVDPAKLSYKSTLE HHCCCCCEEEEEHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCHHCCHHHHHH LLDYLNSNDYNVVFDQDNLVHKAQQMLSQVVDVPCTTIQEHAIQYSGRSVASKIEELRRT HHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHH MKQTRSDFYVDSKLDHIAWLLNIRARDVECTPLVISYLFVSLDKIILYVDDRKITPAIKK HHHHHHCEEECCCHHHHHHEEEEECCCCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHHH YFDDNHIQTRDYYQFYQDLEATTGKYLLDGANINYKVPLSINKNQNSSCYFLMIDSPVGL HCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCH SKALKNPVEINGSKEAHRKDAAAFISWWHWIENNYQGVDEIEAAAKLREFRAQQQGYVED HHHHCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHC SFSYIVGHAANGAIIHYMAKKDANLKKIDDQAPLLCDSGGQYREGTTDITRVLHFGKPSK CHHEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCH EHRKYYTLVLKGHLGLGRAVFPKGTTGSQLDVLAREHLWHFCADYAHGTGHGVGSFLGVH HCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCC EGPQRINSVSKVELMPGMILSNEPGAYFPGEFGIRIENLCYIKQRNQESPTGHGPFYCFE CCHHHHCCCHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEC DLTLVPYEYKLIETWMLTYTEKKTINNYYSRIRKEVLPLINDPQVREFLLFKTRHIK CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]