Definition Francisella tularensis subsp. holarctica LVS chromosome, complete genome.
Accession NC_007880
Length 1,895,994

Click here to switch to the map view.

The map label for this gene is 89256227

Identifier: 89256227

GI number: 89256227

Start: 847543

End: 849000

Strand: Reverse

Name: 89256227

Synonym: FTL_0867

Alternate gene names: NA

Gene position: 849000-847543 (Counterclockwise)

Preceding gene: 89256228

Following gene: 89256223

Centisome position: 44.78

GC content: 31.07

Gene sequence:

>1458_bases
ATGAAGTATATTTACAAAAAATTATTAATATATAGTTTTTTTATGTGTTCAATTTGTCACTCATATGCGGAGCTTAATAA
TCAAATCTCCATTTTAGAATTACAGAAACAAATTAAAGAATTACAAACCGAGATTAATCACTTTGAAGAAACAAAAATAA
ATGAAAACTTTGAATTCACAACTTATAGTAGTGAAGTTGTAGATAGTAAATCTAAATTGAGAAATAAAGAAACTAAAGTA
TTATATACAGTTCAAAACAATAATGTTGACATAATCCAAAATATTAGTCCTGAAAGCACAATTATTGATCTTAGAGGAAA
ACCCTTAGGTAAAATATTCAATCAAAATGGTAGTATTGATGTTGGAAATGCTCCGGCTATTACAACAGATGGCCAAGCTG
CTTACCTAGGATCATATTCAGGTAACAATAGCATCCCCATAGGAATGATTCCAGGAAAACTATTTGCATCAACAATTATA
TTACAAAAAGAAAAATTCGATCAATATTCTATATTTTTAGGAGGCTTAATTAGAGTAGATGCCCAAACTTGGTTTGGAGA
TTCAATATCTAGGGTAGATTTTAATAATAATCCAACAACCTCTTTTGACTCCAAAGGTCAAAATATATATCTTTCTACAG
CTCGTTTATTCTTTCTTGCAAATATGGGAAATTATATAACAGCTGCATATGATGTAAGCACCTCTGAATTAAACAACTTT
AACATTGGAGATGCATTTGTTATAATAGGAAATATGGATGTATCGCCATACTTTATAACTGTAGGTAAAAGTACTCTAAC
TATAGCAAATCTTGGTGGAGGAGGACCTTCAACAAGTGGTATTGCAAACTTCCTAAATACTGGACGAGCTACAAATATAT
TACTAAATTACAAGACTAGCACCCTTAACGTTAGCGTTGCATTTTTTAGTACAAACGATCAAAAAGCAAATTTTTCGGCT
GGCTTATTTTATGCTGATAAGTGGACTGATAATTTATCTGTTGGATTTAACACAGGCTATGTTTATGATTTAGCTGGTGC
TGAAAACTCTAGCATTCCTAGAATCGCTTTAAATAAAACTATAGGTGCTTTTAGTATTGATGCTAACATTGCTTATACAA
TTAATTCAGGGATATTTCAAATAAACTCAGGTTGGGGGTCTACCACTAATTCTTTTGATTTTAATCTAATAGGAGAGAAT
GTCTTAGCTGGAGCGTGGTATATTGCGGGTAACTATAGTGCAAATATATTTGGAAGAAATAGTAATTTTAATGCTACATA
TGGTGAAAGTTATAATGCTGCGGCGATACAATGTCTATCGCCGGAAGTCGATTACAAAATGGATTATCAAAATCGGGCAT
TAAAAGACAAATTAATTTTTCAGCCCAAAGATCATATTTCGATGACAGTGTACTATTTGGTCCTGAATATGCATATCAAA
AATTTTATAATGATGTAA

Upstream 100 bases:

>100_bases
GTACTTTTATTTGGCTACTGAGAAACTATTTTTGTGCACAGAACCTAATATTTTTTACAAAATGATACAATGAACTGAGA
GTTGTATTTTTTATATAGTT

Downstream 100 bases:

>100_bases
AACACCATGCATTATCTTTAGATATGTCAATATATTTATAGAGCTATTTCTATCTATACTTTTAAGTTTTAGATAGCGAG
AGTGTAAACTAAAAGATAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MKYIYKKLLIYSFFMCSICHSYAELNNQISILELQKQIKELQTEINHFEETKINENFEFTTYSSEVVDSKSKLRNKETKV
LYTVQNNNVDIIQNISPESTIIDLRGKPLGKIFNQNGSIDVGNAPAITTDGQAAYLGSYSGNNSIPIGMIPGKLFASTII
LQKEKFDQYSIFLGGLIRVDAQTWFGDSISRVDFNNNPTTSFDSKGQNIYLSTARLFFLANMGNYITAAYDVSTSELNNF
NIGDAFVIIGNMDVSPYFITVGKSTLTIANLGGGGPSTSGIANFLNTGRATNILLNYKTSTLNVSVAFFSTNDQKANFSA
GLFYADKWTDNLSVGFNTGYVYDLAGAENSSIPRIALNKTIGAFSIDANIAYTINSGIFQINSGWGSTTNSFDFNLIGEN
VLAGAWYIAGNYSANIFGRNSNFNATYGESYNAAAIQCLSPEVDYKMDYQNRALKDKLIFQPKDHISMTVYYLVLNMHIK
NFIMM

Sequences:

>Translated_485_residues
MKYIYKKLLIYSFFMCSICHSYAELNNQISILELQKQIKELQTEINHFEETKINENFEFTTYSSEVVDSKSKLRNKETKV
LYTVQNNNVDIIQNISPESTIIDLRGKPLGKIFNQNGSIDVGNAPAITTDGQAAYLGSYSGNNSIPIGMIPGKLFASTII
LQKEKFDQYSIFLGGLIRVDAQTWFGDSISRVDFNNNPTTSFDSKGQNIYLSTARLFFLANMGNYITAAYDVSTSELNNF
NIGDAFVIIGNMDVSPYFITVGKSTLTIANLGGGGPSTSGIANFLNTGRATNILLNYKTSTLNVSVAFFSTNDQKANFSA
GLFYADKWTDNLSVGFNTGYVYDLAGAENSSIPRIALNKTIGAFSIDANIAYTINSGIFQINSGWGSTTNSFDFNLIGEN
VLAGAWYIAGNYSANIFGRNSNFNATYGESYNAAAIQCLSPEVDYKMDYQNRALKDKLIFQPKDHISMTVYYLVLNMHIK
NFIMM
>Mature_485_residues
MKYIYKKLLIYSFFMCSICHSYAELNNQISILELQKQIKELQTEINHFEETKINENFEFTTYSSEVVDSKSKLRNKETKV
LYTVQNNNVDIIQNISPESTIIDLRGKPLGKIFNQNGSIDVGNAPAITTDGQAAYLGSYSGNNSIPIGMIPGKLFASTII
LQKEKFDQYSIFLGGLIRVDAQTWFGDSISRVDFNNNPTTSFDSKGQNIYLSTARLFFLANMGNYITAAYDVSTSELNNF
NIGDAFVIIGNMDVSPYFITVGKSTLTIANLGGGGPSTSGIANFLNTGRATNILLNYKTSTLNVSVAFFSTNDQKANFSA
GLFYADKWTDNLSVGFNTGYVYDLAGAENSSIPRIALNKTIGAFSIDANIAYTINSGIFQINSGWGSTTNSFDFNLIGEN
VLAGAWYIAGNYSANIFGRNSNFNATYGESYNAAAIQCLSPEVDYKMDYQNRALKDKLIFQPKDHISMTVYYLVLNMHIK
NFIMM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53738; Mature: 53738

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYIYKKLLIYSFFMCSICHSYAELNNQISILELQKQIKELQTEINHFEETKINENFEFT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
TYSSEVVDSKSKLRNKETKVLYTVQNNNVDIIQNISPESTIIDLRGKPLGKIFNQNGSID
EECHHHHCCHHHHCCCCCEEEEEEECCCEEEEECCCCCCEEEEECCCCHHHHHCCCCCEE
VGNAPAITTDGQAAYLGSYSGNNSIPIGMIPGKLFASTIILQKEKFDQYSIFLGGLIRVD
CCCCCEEECCCCEEEEECCCCCCCEEEEECCHHHHHHEEEEECCCCCCEEEEECCEEEEE
AQTWFGDSISRVDFNNNPTTSFDSKGQNIYLSTARLFFLANMGNYITAAYDVSTSELNNF
CCHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCHHHCCCC
NIGDAFVIIGNMDVSPYFITVGKSTLTIANLGGGGPSTSGIANFLNTGRATNILLNYKTS
CCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEEEE
TLNVSVAFFSTNDQKANFSAGLFYADKWTDNLSVGFNTGYVYDLAGAENSSIPRIALNKT
EEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEECCC
IGAFSIDANIAYTINSGIFQINSGWGSTTNSFDFNLIGENVLAGAWYIAGNYSANIFGRN
CCEEEECCEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEECCEEEEEECC
SNFNATYGESYNAAAIQCLSPEVDYKMDYQNRALKDKLIFQPKDHISMTVYYLVLNMHIK
CCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHEEECCCCHHEEEEEEEHHHHHHH
NFIMM
HHCCC
>Mature Secondary Structure
MKYIYKKLLIYSFFMCSICHSYAELNNQISILELQKQIKELQTEINHFEETKINENFEFT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
TYSSEVVDSKSKLRNKETKVLYTVQNNNVDIIQNISPESTIIDLRGKPLGKIFNQNGSID
EECHHHHCCHHHHCCCCCEEEEEEECCCEEEEECCCCCCEEEEECCCCHHHHHCCCCCEE
VGNAPAITTDGQAAYLGSYSGNNSIPIGMIPGKLFASTIILQKEKFDQYSIFLGGLIRVD
CCCCCEEECCCCEEEEECCCCCCCEEEEECCHHHHHHEEEEECCCCCCEEEEECCEEEEE
AQTWFGDSISRVDFNNNPTTSFDSKGQNIYLSTARLFFLANMGNYITAAYDVSTSELNNF
CCHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCEEEEEEECCHHHCCCC
NIGDAFVIIGNMDVSPYFITVGKSTLTIANLGGGGPSTSGIANFLNTGRATNILLNYKTS
CCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEEEEEE
TLNVSVAFFSTNDQKANFSAGLFYADKWTDNLSVGFNTGYVYDLAGAENSSIPRIALNKT
EEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCEEEEECCCCCCCCCEEEECCC
IGAFSIDANIAYTINSGIFQINSGWGSTTNSFDFNLIGENVLAGAWYIAGNYSANIFGRN
CCEEEECCEEEEEEECCEEEEECCCCCCCCCEEEEEECCCEEEEEEEEEECCEEEEEECC
SNFNATYGESYNAAAIQCLSPEVDYKMDYQNRALKDKLIFQPKDHISMTVYYLVLNMHIK
CCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCHHHHEEECCCCHHEEEEEEEHHHHHHH
NFIMM
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA