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The map label for this gene is ydjN [C]

Identifier: 89256223

GI number: 89256223

Start: 842733

End: 844007

Strand: Reverse

Name: ydjN [C]

Synonym: FTL_0863

Alternate gene names: 89256223

Gene position: 844007-842733 (Counterclockwise)

Preceding gene: 89256227

Following gene: 89256220

Centisome position: 44.52

GC content: 33.02

Gene sequence:

>1275_bases
ATGGCAATTTTACTTATAATTTCTTTGCTAATTTTAGTATATCTTCACCTAAAAAAAATTAGCTTTAATTTCCGGACTAT
ACTCGCATTAATAATCGGTGTTGTTATTGGGATTATCTACAATTCTACTGATTATTATAGCAATAGCTTCATACAAATTA
GCAATATATTGGGTGATGGCTATATTTCTTTACTTAAGATGTTGATTATTCCAATTGTATTAACATCAATAATTCACTCA
ATAATTAACCTAAAAAACTATGAGGGCTCTTATGTTATAAGATTTTCCTATAAAACTATAGCAATACTTTTAATCTTAAC
TGGTATAAGTGCTGCAATAGGCGCTAGTGTTGCTATTATTATGCATTTAGGACAAGGCATAGATATCGCATCTATCACAG
GTAATGTTACCAAAAACATCAAGACCTCGAGTATATCCGAGACTATTCTAGGCTTCTTACCTGATAATATTTTCCATCAA
ATGGATAACAATAATGTCATGGCTGTAGTAATATTTGCGATACTTCTTGGTTTTGCAATGCTAATTGCACATCGTGAAGA
TAGTAAGTTAGCTGCTCCATTTATCAGTTTTATTGATTCAGCATTTTTTGTGATAAAGAAATTAGCTAGAATGATTATTG
CTATAACACCTTATGGTGTACTTGGTCTGATGGTACAAATGAGTATTGAGCTTGATAAGAATAGTATCTCAACGGTCTTA
TACTTCATTTTAACTTGTTATATCGCATTAATAATTGTTCTAATAATGCATATTACCCTTCTAGTTTTATTTAGGACCAA
TATTGTTAGATTCTACAGAAGTATTTGGAAAGCTATGCTCGTAGCTGCTACTTCTAGATCAAGTATGGGCACACTACCAT
TATCAATTGATGGTCTAAATAAATATGGTACTACTAGTAGTATTGCTACATTTGCACCAACTATGGGTACAACTCTAGGA
ATGAATGGCTGTGCTGGTGTATTCCCCGCAGTATTAGCAATTATGGCTATGAATGCTACTGGAGTGGATATTACTTTCTC
AACTGTAGTATTAATTTCTCTAATTTGTATGCTAGCTTCACTTGGTGTCTCTGGGATACCTGGTACAGCTTTTGTTGCAG
CTGGTGTGGTTTTCTCTTACTTTGGCTTGCCATGGCAACTGATAGCTCTAATTATAGGAGTTGATGCTATTATAGATAGC
TTTAGAACGCCTCTTAACATTCATGGTACTATGACTACAGCTATTATTGTTGATAAAACTACTAAAGCTTCTTAG

Upstream 100 bases:

>100_bases
TTTAATCAGCATTAAATATTTTACCAACCATATAGTATACCAGTTTAGTAAATTATGTTAGAATTCTCAGCTATCAATTT
TCTATTCTAAGGAGTTGCGT

Downstream 100 bases:

>100_bases
ATTGATTAAATATTGCTTTATATATTTCAGTTTAAGTCCCACAAAAAGTAAATCTAATCTTTTCTTCCTCAACTGGTTCT
GTTATATACTTTTCAGTTAG

Product: Sodium-dicarboxylate symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 423

Protein sequence:

>424_residues
MAILLIISLLILVYLHLKKISFNFRTILALIIGVVIGIIYNSTDYYSNSFIQISNILGDGYISLLKMLIIPIVLTSIIHS
IINLKNYEGSYVIRFSYKTIAILLILTGISAAIGASVAIIMHLGQGIDIASITGNVTKNIKTSSISETILGFLPDNIFHQ
MDNNNVMAVVIFAILLGFAMLIAHREDSKLAAPFISFIDSAFFVIKKLARMIIAITPYGVLGLMVQMSIELDKNSISTVL
YFILTCYIALIIVLIMHITLLVLFRTNIVRFYRSIWKAMLVAATSRSSMGTLPLSIDGLNKYGTTSSIATFAPTMGTTLG
MNGCAGVFPAVLAIMAMNATGVDITFSTVVLISLICMLASLGVSGIPGTAFVAAGVVFSYFGLPWQLIALIIGVDAIIDS
FRTPLNIHGTMTTAIIVDKTTKAS

Sequences:

>Translated_424_residues
MAILLIISLLILVYLHLKKISFNFRTILALIIGVVIGIIYNSTDYYSNSFIQISNILGDGYISLLKMLIIPIVLTSIIHS
IINLKNYEGSYVIRFSYKTIAILLILTGISAAIGASVAIIMHLGQGIDIASITGNVTKNIKTSSISETILGFLPDNIFHQ
MDNNNVMAVVIFAILLGFAMLIAHREDSKLAAPFISFIDSAFFVIKKLARMIIAITPYGVLGLMVQMSIELDKNSISTVL
YFILTCYIALIIVLIMHITLLVLFRTNIVRFYRSIWKAMLVAATSRSSMGTLPLSIDGLNKYGTTSSIATFAPTMGTTLG
MNGCAGVFPAVLAIMAMNATGVDITFSTVVLISLICMLASLGVSGIPGTAFVAAGVVFSYFGLPWQLIALIIGVDAIIDS
FRTPLNIHGTMTTAIIVDKTTKAS
>Mature_423_residues
AILLIISLLILVYLHLKKISFNFRTILALIIGVVIGIIYNSTDYYSNSFIQISNILGDGYISLLKMLIIPIVLTSIIHSI
INLKNYEGSYVIRFSYKTIAILLILTGISAAIGASVAIIMHLGQGIDIASITGNVTKNIKTSSISETILGFLPDNIFHQM
DNNNVMAVVIFAILLGFAMLIAHREDSKLAAPFISFIDSAFFVIKKLARMIIAITPYGVLGLMVQMSIELDKNSISTVLY
FILTCYIALIIVLIMHITLLVLFRTNIVRFYRSIWKAMLVAATSRSSMGTLPLSIDGLNKYGTTSSIATFAPTMGTTLGM
NGCAGVFPAVLAIMAMNATGVDITFSTVVLISLICMLASLGVSGIPGTAFVAAGVVFSYFGLPWQLIALIIGVDAIIDSF
RTPLNIHGTMTTAIIVDKTTKAS

Specific function: Unknown

COG id: COG1823

COG function: function code R; Predicted Na+/dicarboxylate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]

Homologues:

Organism=Homo sapiens, GI194239697, Length=253, Percent_Identity=29.2490118577075, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI66773030, Length=302, Percent_Identity=26.4900662251656, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI40254478, Length=460, Percent_Identity=24.5652173913043, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI169790839, Length=370, Percent_Identity=23.2432432432432, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4827012, Length=413, Percent_Identity=23.4866828087167, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI223468566, Length=275, Percent_Identity=25.0909090909091, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI223468564, Length=269, Percent_Identity=25.6505576208178, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI5032093, Length=277, Percent_Identity=24.9097472924188, Blast_Score=70, Evalue=3e-12,
Organism=Escherichia coli, GI1788024, Length=407, Percent_Identity=30.958230958231, Blast_Score=189, Evalue=3e-49,
Organism=Escherichia coli, GI1790514, Length=418, Percent_Identity=23.6842105263158, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1789947, Length=418, Percent_Identity=24.4019138755981, Blast_Score=104, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71996953, Length=459, Percent_Identity=25.0544662309368, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17537407, Length=421, Percent_Identity=23.7529691211401, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71983106, Length=450, Percent_Identity=24, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71983099, Length=450, Percent_Identity=24, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193206654, Length=453, Percent_Identity=22.7373068432671, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24583025, Length=441, Percent_Identity=27.2108843537415, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17137668, Length=441, Percent_Identity=27.2108843537415, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583023, Length=441, Percent_Identity=27.2108843537415, Blast_Score=110, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001991 [H]

Pfam domain/function: PF00375 SDF [H]

EC number: NA

Molecular weight: Translated: 45789; Mature: 45658

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILLIISLLILVYLHLKKISFNFRTILALIIGVVIGIIYNSTDYYSNSFIQISNILGDG
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCH
YISLLKMLIIPIVLTSIIHSIINLKNYEGSYVIRFSYKTIAILLILTGISAAIGASVAII
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MHLGQGIDIASITGNVTKNIKTSSISETILGFLPDNIFHQMDNNNVMAVVIFAILLGFAM
HHHCCCCEEEECCCCHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHH
LIAHREDSKLAAPFISFIDSAFFVIKKLARMIIAITPYGVLGLMVQMSIELDKNSISTVL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECHHHHHHHH
YFILTCYIALIIVLIMHITLLVLFRTNIVRFYRSIWKAMLVAATSRSSMGTLPLSIDGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
KYGTTSSIATFAPTMGTTLGMNGCAGVFPAVLAIMAMNATGVDITFSTVVLISLICMLAS
CCCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LGVSGIPGTAFVAAGVVFSYFGLPWQLIALIIGVDAIIDSFRTPLNIHGTMTTAIIVDKT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEEEECC
TKAS
CCCC
>Mature Secondary Structure 
AILLIISLLILVYLHLKKISFNFRTILALIIGVVIGIIYNSTDYYSNSFIQISNILGDG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCH
YISLLKMLIIPIVLTSIIHSIINLKNYEGSYVIRFSYKTIAILLILTGISAAIGASVAII
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
MHLGQGIDIASITGNVTKNIKTSSISETILGFLPDNIFHQMDNNNVMAVVIFAILLGFAM
HHHCCCCEEEECCCCHHCCCCHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHH
LIAHREDSKLAAPFISFIDSAFFVIKKLARMIIAITPYGVLGLMVQMSIELDKNSISTVL
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECHHHHHHHH
YFILTCYIALIIVLIMHITLLVLFRTNIVRFYRSIWKAMLVAATSRSSMGTLPLSIDGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
KYGTTSSIATFAPTMGTTLGMNGCAGVFPAVLAIMAMNATGVDITFSTVVLISLICMLAS
CCCCCCHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LGVSGIPGTAFVAAGVVFSYFGLPWQLIALIIGVDAIIDSFRTPLNIHGTMTTAIIVDKT
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEEEECC
TKAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]