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The map label for this gene is ydiU [C]

Identifier: 89256222

GI number: 89256222

Start: 841307

End: 842701

Strand: Direct

Name: ydiU [C]

Synonym: FTL_0862

Alternate gene names: 89256222

Gene position: 841307-842701 (Clockwise)

Preceding gene: 89256221

Following gene: 89256224

Centisome position: 44.37

GC content: 32.04

Gene sequence:

>1395_bases
ATGATTGATTTTCAATACACTTATAGTCAGTTATCAGAGCAATTCTACTCACGCCAAGCAGTATATAAATATCCTAATGC
AAAATTACTAATTTTAAATGATTGTTTAGTTACTGAATTAGGTCTGGATTTAGCCAATAAATCAGAACAACAATTATTAG
AGTTTCTTTTGGGTTATAGCAGTAAAAAACCAATCTCACAAGCTTATGCTGGACATCAGTTTGGTAATTTTACAATGTTA
GGTGATGGACGTGCTATATTAATTGGCGAATATAAAAAGCCAAATGGGGAGTTAGTTGATTTTCATTTAAAAGGAGCGGG
CTTAACAAAGTTTTCACGTGGTGGAGATGGTAAAGCAGCTTTAGCGCCAATGCTCAGAGAATATATAGTTAGTAAAGCTA
TGTACAATCTAGGTATACCAACTAGTCGTATTTTAGCTGTTATAACCACGGGTGAAAATATTCAAAGAAACCAGCTAAAA
CAAGGTGCTATAGCTGTTAGAGTTGCTAGTAGTCATATCCGTGTCGGGACATTTCAATATGCAGCAATGCTTGGTGAGAG
TTATAGCCAAGAATTATTAGATTATACAATCACAAGACATAATATCCCCCATAATGATAATAAGGCTTTGAGTCTACTTG
ATTATGTAATTGCTAAACAAACAAGCTTAATAACAGAGTGGGAGCGAGTTGGTTTTATTCATGGTGTGATGAATACAGAT
AATATGACTATCTCAGGTGAAACTATTGATTATGGTCCTTGTGCATTTATGGATAGTTATGATCCAGATACAGTTTTTAG
CTCAATAGATCGTCATGGTAGATATGCTTTTGCAAATCAAGCTTCAATCGCTGGATGGAATATAGCAAGGTTAGCAGAAA
GTTTATTGAAACTTATTTCAGCAGATGAGGAAGAGGCGATTAAATTAGCTCAAGATAAATTGCAAAGTTATTCAGAAACT
TATAAAAATAAATGGCAAAAAATGTTTCTTGCTAAGCTAGGACTTAGTATTAATAAAGCACATAATGATGAAATGATTTC
AGACTTACTTATAGAAATGTTTAAATTTAAGTTAGATTATACCAACACATTTTACAATCTAACATATAAAAACTTTGGAG
CATTAAAAGATTGTGGTTTAGGAGAATGGTTAGAAAAATATATAACCAAAAATGAGATAAATTTTGCAAATATGAAGAAG
ATAAATCCTGTAATTATTCCTCGTAATCATCAGGTAGAAAAAGCACTTAAGTCTGCCGAAGATACTAAGTTTGGCAATTT
ATATAACCTTGTAGCAGCTCTTAAAACACCTTATGAATTTAATATTCTAACTGAAAAGTATATAACAGAACCAGTTGAGG
AAGAAAAGATTAGATTTACTTTTTGTGGGACTTAA

Upstream 100 bases:

>100_bases
GCTTGTACTTTTATTTGGCTACTGAGAAACTATTTTTGTGCACAGAACCTAGCTATATTTTGTTAAAATTATACTAATTT
AGTAAAGTTTATGGTTTATT

Downstream 100 bases:

>100_bases
ACTGAAATATATAAAGCAATATTTAATCAATCTAAGAAGCTTTAGTAGTTTTATCAACAATAATAGCTGTAGTCATAGTA
CCATGAATGTTAAGAGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 464

Protein sequence:

>464_residues
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYSSKKPISQAYAGHQFGNFTML
GDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAALAPMLREYIVSKAMYNLGIPTSRILAVITTGENIQRNQLK
QGAIAVRVASSHIRVGTFQYAAMLGESYSQELLDYTITRHNIPHNDNKALSLLDYVIAKQTSLITEWERVGFIHGVMNTD
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLISADEEEAIKLAQDKLQSYSET
YKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDYTNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKK
INPVIIPRNHQVEKALKSAEDTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKIRFTFCGT

Sequences:

>Translated_464_residues
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYSSKKPISQAYAGHQFGNFTML
GDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAALAPMLREYIVSKAMYNLGIPTSRILAVITTGENIQRNQLK
QGAIAVRVASSHIRVGTFQYAAMLGESYSQELLDYTITRHNIPHNDNKALSLLDYVIAKQTSLITEWERVGFIHGVMNTD
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLISADEEEAIKLAQDKLQSYSET
YKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDYTNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKK
INPVIIPRNHQVEKALKSAEDTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKIRFTFCGT
>Mature_464_residues
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYSSKKPISQAYAGHQFGNFTML
GDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAALAPMLREYIVSKAMYNLGIPTSRILAVITTGENIQRNQLK
QGAIAVRVASSHIRVGTFQYAAMLGESYSQELLDYTITRHNIPHNDNKALSLLDYVIAKQTSLITEWERVGFIHGVMNTD
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLISADEEEAIKLAQDKLQSYSET
YKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDYTNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKK
INPVIIPRNHQVEKALKSAEDTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKIRFTFCGT

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=374, Percent_Identity=35.2941176470588, Blast_Score=213, Evalue=4e-55,
Organism=Escherichia coli, GI1787999, Length=422, Percent_Identity=35.3080568720379, Blast_Score=264, Evalue=7e-72,
Organism=Saccharomyces cerevisiae, GI6325034, Length=351, Percent_Identity=32.7635327635328, Blast_Score=157, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 52580; Mature: 52580

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYS
CCCCCHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCC
SKKPISQAYAGHQFGNFTMLGDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAA
CCCCHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH
LAPMLREYIVSKAMYNLGIPTSRILAVITTGENIQRNQLKQGAIAVRVASSHIRVGTFQY
HHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHCCCEEEEEECCCEEEHHHHH
AAMLGESYSQELLDYTITRHNIPHNDNKALSLLDYVIAKQTSLITEWERVGFIHGVMNTD
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLIS
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHC
ADEEEAIKLAQDKLQSYSETYKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCC
TNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKKINPVIIPRNHQVEKALKSAE
CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC
DTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKIRFTFCGT
CCCCCHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCEEEEEECC
>Mature Secondary Structure
MIDFQYTYSQLSEQFYSRQAVYKYPNAKLLILNDCLVTELGLDLANKSEQQLLEFLLGYS
CCCCCHHHHHHHHHHHCCCHHEECCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCC
SKKPISQAYAGHQFGNFTMLGDGRAILIGEYKKPNGELVDFHLKGAGLTKFSRGGDGKAA
CCCCHHHHHCCCCCCCEEEECCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHH
LAPMLREYIVSKAMYNLGIPTSRILAVITTGENIQRNQLKQGAIAVRVASSHIRVGTFQY
HHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCHHHHHCCCEEEEEECCCEEEHHHHH
AAMLGESYSQELLDYTITRHNIPHNDNKALSLLDYVIAKQTSLITEWERVGFIHGVMNTD
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCC
NMTISGETIDYGPCAFMDSYDPDTVFSSIDRHGRYAFANQASIAGWNIARLAESLLKLIS
CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHC
ADEEEAIKLAQDKLQSYSETYKNKWQKMFLAKLGLSINKAHNDEMISDLLIEMFKFKLDY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHCC
TNTFYNLTYKNFGALKDCGLGEWLEKYITKNEINFANMKKINPVIIPRNHQVEKALKSAE
CCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCC
DTKFGNLYNLVAALKTPYEFNILTEKYITEPVEEEKIRFTFCGT
CCCCCHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA