Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is hemH [H]
Identifier: 89256184
GI number: 89256184
Start: 804244
End: 805245
Strand: Reverse
Name: hemH [H]
Synonym: FTL_0821
Alternate gene names: 89256184
Gene position: 805245-804244 (Counterclockwise)
Preceding gene: 89256187
Following gene: 89256182
Centisome position: 42.47
GC content: 29.24
Gene sequence:
>1002_bases ATGCAACAATATAGCAGCAAATATAACAAACAAGCTATTCTATTAGTCAATCTTGGAACTCCAGACAATTATGATACTAA ATCTATAAAAAGATATTTAAAAGAATTTCTATCTGACCCTAGAGTAATAGAAGCCAACCCTATATTATGGAAAATAATCT TAAACTTGATCATTTTACCAATTCGTGCTAAAAAAAATATTCATACTTATAAAACTGTTTGGAATAAACAACATAACAAA TCTCCACTATTATTCTACACAGAAAATTTAGCAGATAAATTGGATAAAAAACTAGATAACTATATCGTTGATTATGCTAT GCGTTATGGCAATCCAAGTATAGAAAGTAAAATTAAAAGCTTACAAGATCAAGGCGCTACTGAAATAATAATATTTCCAC TGTATCCCCAATATTCTGCTACTACTACAGCAACAGTATATGATGAGGTTTATAGAGTTTTATCAAAACTAAGATGGCAA CCTACTATTAAGGGAATAAATCCTTATTATGATAATAAGTTTCATATTCAGACTATTTCTCAACAGATAAAAGAACATCT AAAAAAGCTAGACAGTACTCCTGATACTGTTTTGTTTTCATTTCATGGTTTACCAAAAGAATATTTTGATAAAGGCGACC CTTACTACTGTCACTGCTACAAAACTTATCGTTTAGTCAAAGAAGAATTACAAAACGAATATCCTAATATAGATTTTGAA CTATCCTTCCAATCTCGCTTTGGACCTAAGAAGTGGTTAGAACCATATACTACCGTAAAGTTAGAAGAATTTGCTAAGCA AAATAAGAGTGTAGTCATTATTGCTCCAGGATTTAGTGCTGATTGTTTGGAGACATTAGAAGAGTTAGCAATTTCTGAAA AAGAAAATTTCATTAAAAAAGGTGGTAAAGAATTTAGTCTAATACCATGTTTAAATGATTCTAATCAACATGTCGATATG TTATACAATATAATAGATGAGGAAATATGTCTAAAAAAATAG
Upstream 100 bases:
>100_bases TTATAACTTGTTTATAGACTTATATGAAAAAAATTTAACTTTGGTAACGAGATTATTTGCTAAAATTACTTTTAGATTAT AAATTAAAATTAGTAAAAAT
Downstream 100 bases:
>100_bases CTATACATTGGTTTCGTCAAGATTTACGCTTAGCAGACAATCCTGCTCTATATCAGGTTAGTCAAGCCGATGAAACAATT ACAATATTTATACTAGGTTC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MQQYSSKYNKQAILLVNLGTPDNYDTKSIKRYLKEFLSDPRVIEANPILWKIILNLIILPIRAKKNIHTYKTVWNKQHNK SPLLFYTENLADKLDKKLDNYIVDYAMRYGNPSIESKIKSLQDQGATEIIIFPLYPQYSATTTATVYDEVYRVLSKLRWQ PTIKGINPYYDNKFHIQTISQQIKEHLKKLDSTPDTVLFSFHGLPKEYFDKGDPYYCHCYKTYRLVKEELQNEYPNIDFE LSFQSRFGPKKWLEPYTTVKLEEFAKQNKSVVIIAPGFSADCLETLEELAISEKENFIKKGGKEFSLIPCLNDSNQHVDM LYNIIDEEICLKK
Sequences:
>Translated_333_residues MQQYSSKYNKQAILLVNLGTPDNYDTKSIKRYLKEFLSDPRVIEANPILWKIILNLIILPIRAKKNIHTYKTVWNKQHNK SPLLFYTENLADKLDKKLDNYIVDYAMRYGNPSIESKIKSLQDQGATEIIIFPLYPQYSATTTATVYDEVYRVLSKLRWQ PTIKGINPYYDNKFHIQTISQQIKEHLKKLDSTPDTVLFSFHGLPKEYFDKGDPYYCHCYKTYRLVKEELQNEYPNIDFE LSFQSRFGPKKWLEPYTTVKLEEFAKQNKSVVIIAPGFSADCLETLEELAISEKENFIKKGGKEFSLIPCLNDSNQHVDM LYNIIDEEICLKK >Mature_333_residues MQQYSSKYNKQAILLVNLGTPDNYDTKSIKRYLKEFLSDPRVIEANPILWKIILNLIILPIRAKKNIHTYKTVWNKQHNK SPLLFYTENLADKLDKKLDNYIVDYAMRYGNPSIESKIKSLQDQGATEIIIFPLYPQYSATTTATVYDEVYRVLSKLRWQ PTIKGINPYYDNKFHIQTISQQIKEHLKKLDSTPDTVLFSFHGLPKEYFDKGDPYYCHCYKTYRLVKEELQNEYPNIDFE LSFQSRFGPKKWLEPYTTVKLEEFAKQNKSVVIIAPGFSADCLETLEELAISEKENFIKKGGKEFSLIPCLNDSNQHVDM LYNIIDEEICLKK
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=315, Percent_Identity=28.2539682539683, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI60499021, Length=315, Percent_Identity=28.2539682539683, Blast_Score=103, Evalue=2e-22, Organism=Escherichia coli, GI1786681, Length=320, Percent_Identity=37.8125, Blast_Score=239, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6324750, Length=315, Percent_Identity=26.3492063492064, Blast_Score=81, Evalue=3e-16, Organism=Drosophila melanogaster, GI17864156, Length=347, Percent_Identity=24.207492795389, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24651774, Length=273, Percent_Identity=24.1758241758242, Blast_Score=89, Evalue=6e-18, Organism=Drosophila melanogaster, GI45552018, Length=159, Percent_Identity=28.9308176100629, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39062; Mature: 39062
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQYSSKYNKQAILLVNLGTPDNYDTKSIKRYLKEFLSDPRVIEANPILWKIILNLIILP CCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC IRAKKNIHTYKTVWNKQHNKSPLLFYTENLADKLDKKLDNYIVDYAMRYGNPSIESKIKS CCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LQDQGATEIIIFPLYPQYSATTTATVYDEVYRVLSKLRWQPTIKGINPYYDNKFHIQTIS HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHH QQIKEHLKKLDSTPDTVLFSFHGLPKEYFDKGDPYYCHCYKTYRLVKEELQNEYPNIDFE HHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEE LSFQSRFGPKKWLEPYTTVKLEEFAKQNKSVVIIAPGFSADCLETLEELAISEKENFIKK EEEHHCCCCHHHCCCHHHEEHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC GGKEFSLIPCLNDSNQHVDMLYNIIDEEICLKK CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQQYSSKYNKQAILLVNLGTPDNYDTKSIKRYLKEFLSDPRVIEANPILWKIILNLIILP CCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC IRAKKNIHTYKTVWNKQHNKSPLLFYTENLADKLDKKLDNYIVDYAMRYGNPSIESKIKS CCCCCCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LQDQGATEIIIFPLYPQYSATTTATVYDEVYRVLSKLRWQPTIKGINPYYDNKFHIQTIS HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHH QQIKEHLKKLDSTPDTVLFSFHGLPKEYFDKGDPYYCHCYKTYRLVKEELQNEYPNIDFE HHHHHHHHHHCCCCCEEEEEECCCCHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEE LSFQSRFGPKKWLEPYTTVKLEEFAKQNKSVVIIAPGFSADCLETLEELAISEKENFIKK EEEHHCCCCHHHCCCHHHEEHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC GGKEFSLIPCLNDSNQHVDMLYNIIDEEICLKK CCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA