Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256142
Identifier: 89256142
GI number: 89256142
Start: 749981
End: 750592
Strand: Reverse
Name: 89256142
Synonym: FTL_0759
Alternate gene names: NA
Gene position: 750592-749981 (Counterclockwise)
Preceding gene: 89256143
Following gene: 89256139
Centisome position: 39.59
GC content: 27.78
Gene sequence:
>612_bases ATGTTAAGGTCAATACAGTATAAAGCTTTACCAATATTATACCTATGGGTGGTTGGCATAATCTCTGTTAATATTCACAT ACAAATGTTATCACATGGAGTTCCATATCCAGGAGACTATTTTATACCTCCAAAATTTTATCAATTCTCATTACAATTAG TACAATTATGTGGAATGTATTATTTATATAAGCAAATTACTGAGCGATATTCATATTTCACAAAAATTAAACACATATTA ATTTTTCTTATGATTATGTCAGCGTTAGAAGAGCTGATTTTACGACTTCCTATGACAGAAGGCTACATAGTTGATAAACA TTTTTTGTTTATTTGGTTGAACAACTACTTACCTCAACTCATCTTATTATTTATCTCATGTTATACTGTAGCATTAGTAG ATAGTATAAAAACTATAAAGTTATATGAGAACTTAATAAAATTTATGCTACTAGTTATTTACATAATTATTTTGCAATAT TTGCTTTCACCTATTGTACACACAAGTATAAATATCATTTTTGGTCACATATCTCCACCAAATCCAAATAATATTTTGCA TTCACCATATAACTGGCAAACGAACGTGATTGCATCTGTATTCTTTATTTAG
Upstream 100 bases:
>100_bases AATGATAATTTATACATATTAAGTATTGCAGAGAATCATCTAGTTCTTTTCATAAAAATAAGATAATGTCTATAAATAAC TCTAAAATTATGAGCTTCTC
Downstream 100 bases:
>100_bases CCTATGATTGGATGTTTGCCATAACATGGATTTTTTGGGATAAATTTCCTAGTTACTTTATATTAAAAACCTTATATACA ATAATTATGATTTTAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLRSIQYKALPILYLWVVGIISVNIHIQMLSHGVPYPGDYFIPPKFYQFSLQLVQLCGMYYLYKQITERYSYFTKIKHIL IFLMIMSALEELILRLPMTEGYIVDKHFLFIWLNNYLPQLILLFISCYTVALVDSIKTIKLYENLIKFMLLVIYIIILQY LLSPIVHTSINIIFGHISPPNPNNILHSPYNWQTNVIASVFFI
Sequences:
>Translated_203_residues MLRSIQYKALPILYLWVVGIISVNIHIQMLSHGVPYPGDYFIPPKFYQFSLQLVQLCGMYYLYKQITERYSYFTKIKHIL IFLMIMSALEELILRLPMTEGYIVDKHFLFIWLNNYLPQLILLFISCYTVALVDSIKTIKLYENLIKFMLLVIYIIILQY LLSPIVHTSINIIFGHISPPNPNNILHSPYNWQTNVIASVFFI >Mature_203_residues MLRSIQYKALPILYLWVVGIISVNIHIQMLSHGVPYPGDYFIPPKFYQFSLQLVQLCGMYYLYKQITERYSYFTKIKHIL IFLMIMSALEELILRLPMTEGYIVDKHFLFIWLNNYLPQLILLFISCYTVALVDSIKTIKLYENLIKFMLLVIYIIILQY LLSPIVHTSINIIFGHISPPNPNNILHSPYNWQTNVIASVFFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23946; Mature: 23946
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSIQYKALPILYLWVVGIISVNIHIQMLSHGVPYPGDYFIPPKFYQFSLQLVQLCGMY CCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH YLYKQITERYSYFTKIKHILIFLMIMSALEELILRLPMTEGYIVDKHFLFIWLNNYLPQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH ILLFISCYTVALVDSIKTIKLYENLIKFMLLVIYIIILQYLLSPIVHTSINIIFGHISPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC NPNNILHSPYNWQTNVIASVFFI CCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MLRSIQYKALPILYLWVVGIISVNIHIQMLSHGVPYPGDYFIPPKFYQFSLQLVQLCGMY CCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH YLYKQITERYSYFTKIKHILIFLMIMSALEELILRLPMTEGYIVDKHFLFIWLNNYLPQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHH ILLFISCYTVALVDSIKTIKLYENLIKFMLLVIYIIILQYLLSPIVHTSINIIFGHISPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC NPNNILHSPYNWQTNVIASVFFI CCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA