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The map label for this gene is yjdL [H]

Identifier: 89256101

GI number: 89256101

Start: 702481

End: 702990

Strand: Direct

Name: yjdL [H]

Synonym: FTL_0712

Alternate gene names: 89256101

Gene position: 702481-702990 (Clockwise)

Preceding gene: 89256100

Following gene: 89256107

Centisome position: 37.05

GC content: 34.12

Gene sequence:

>510_bases
ATGAATTCACTTTCAATATTGTTTGGTGGCTTAATTGTTGCATGGATTTGTAAGAGAGTAAAATCACTTGATGATGACTT
TGGTAGAATGATAAAGTTCTCATTTGGTTTTATATTTCAACTGTTATGTTTTGTTTTATTTTTTATAGCAGCCAAAAACG
CTAGTGTAGATGGTACAACATCAGCTTTACTTGTCATCATTGCTTTAGCTTTCTTAGGGGTATCAGAATTATTTATCGAT
CCTATTGCACTATCGGAGATTACATCTGTAAGAGATAAAAAAGATACAGGCTTCTTAGCAGCATCATATATGCTTTTTAC
AGGAAGTGTAGCTGGGTTTATTGGTGCTAAGGTTGCTGATTTGGCAGCTTTTCAGGGTACTCCTAAAAACCTAGATCTAA
TTAAGCAGGCGCAGTTGTTCCAAGGGCTATTTACCAATATCATGGCTATCTTGGCAGTGACAATTATACTATGGTATATT
GTTGCTTTAATCATAAAGAAATTAAAGTAG

Upstream 100 bases:

>100_bases
GTTTGATTAGCAGTTATATACTTCGGTAGAAATTTTTATACATAGAAACGTCGATACATATTTATGGGGAATTGATATTC
CTGCAAGTACTTTTACTTCT

Downstream 100 bases:

>100_bases
TTAAAAATTACCCACAAATAAAAAAAGGATATACAGCGATTATTTGCTGATCTTTTAAAATTATTTTTGCTTTTGATCTT
TCAGTGGTAGGAATTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNSLSILFGGLIVAWICKRVKSLDDDFGRMIKFSFGFIFQLLCFVLFFIAAKNASVDGTTSALLVIIALAFLGVSELFID
PIALSEITSVRDKKDTGFLAASYMLFTGSVAGFIGAKVADLAAFQGTPKNLDLIKQAQLFQGLFTNIMAILAVTIILWYI
VALIIKKLK

Sequences:

>Translated_169_residues
MNSLSILFGGLIVAWICKRVKSLDDDFGRMIKFSFGFIFQLLCFVLFFIAAKNASVDGTTSALLVIIALAFLGVSELFID
PIALSEITSVRDKKDTGFLAASYMLFTGSVAGFIGAKVADLAAFQGTPKNLDLIKQAQLFQGLFTNIMAILAVTIILWYI
VALIIKKLK
>Mature_169_residues
MNSLSILFGGLIVAWICKRVKSLDDDFGRMIKFSFGFIFQLLCFVLFFIAAKNASVDGTTSALLVIIALAFLGVSELFID
PIALSEITSVRDKKDTGFLAASYMLFTGSVAGFIGAKVADLAAFQGTPKNLDLIKQAQLFQGLFTNIMAILAVTIILWYI
VALIIKKLK

Specific function: Probable proton-dependent permease that transports di- and tripeptides. Shows significantly higher specificity towards dipeptides [H]

COG id: COG3104

COG function: function code E; Dipeptide/tripeptide permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTR2/POT transporter (TC 2.A.17) family [H]

Homologues:

Organism=Escherichia coli, GI1790572, Length=120, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1786927, Length=171, Percent_Identity=25.7309941520468, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR000109
- InterPro:   IPR005279
- InterPro:   IPR018456 [H]

Pfam domain/function: PF00854 PTR2 [H]

EC number: NA

Molecular weight: Translated: 18413; Mature: 18413

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLSILFGGLIVAWICKRVKSLDDDFGRMIKFSFGFIFQLLCFVLFFIAAKNASVDGTT
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SALLVIIALAFLGVSELFIDPIALSEITSVRDKKDTGFLAASYMLFTGSVAGFIGAKVAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAAFQGTPKNLDLIKQAQLFQGLFTNIMAILAVTIILWYIVALIIKKLK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSLSILFGGLIVAWICKRVKSLDDDFGRMIKFSFGFIFQLLCFVLFFIAAKNASVDGTT
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SALLVIIALAFLGVSELFIDPIALSEITSVRDKKDTGFLAASYMLFTGSVAGFIGAKVAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAAFQGTPKNLDLIKQAQLFQGLFTNIMAILAVTIILWYIVALIIKKLK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]