| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is yjgA [C]
Identifier: 89256093
GI number: 89256093
Start: 693652
End: 694200
Strand: Direct
Name: yjgA [C]
Synonym: FTL_0704
Alternate gene names: 89256093
Gene position: 693652-694200 (Clockwise)
Preceding gene: 89256090
Following gene: 89256095
Centisome position: 36.59
GC content: 25.68
Gene sequence:
>549_bases ATGGGTAAAGTTATTGATCTTGATGAAATAGATCGCTTAGAAAGAGAAGAAGAAAATTCTTATTATAAAACAGTAAAAAG TAAGACATCTGTAAAAAAAGATGCATTAGAAATAACAGATTTTGGTAGATCTTTGACTGAATTAAGTAAAGAGCAATTAG AAAAAATACCAATCGATGATAATCTTAAAAATAATATTATTACCGCTAAAAGTTTACACAAGATAGCTTTAAAAATACAA ACACAGTTTATTGGTAAACTTTTGCGTAAGACAGATAATCTTGATGAAATTTATAAGGCTTATGATGTCCTTGTTAATAA AGATAAACAAGCAAACCTAATGTTTCAGCATTTAGAAAATATTCGTAATAATCTTTTAGATCCACTTAAAATGAATAATA CATTAGATAAACTAATACAAGAATTTCCGGATTTGGATATTCAAAAGTTAAGGCAGCTTATTAGAAATCATCATAAAGAA GTAGAAAAAAATACCACAAATAAGTCATTTAGAGAGATTTTTAAGTTATTAAGAGGGTTATATGTGTAA
Upstream 100 bases:
>100_bases TGGTAGTCTCCTGATATTTTTTAGGTGGATAAAATAAATTTAATGTTTAAAATTATAACTTATATTATATATATATCGAA ACAAATTAAAAATAAAAGCT
Downstream 100 bases:
>100_bases GACTCTTAGAAAACTTAGCTTTTTGATACAGTAACTTTATTAAAACCATATGCCTTAGCAAATACTGTATTAGCGTATTC ATTCGGATCTTCATGAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGKVIDLDEIDRLEREEENSYYKTVKSKTSVKKDALEITDFGRSLTELSKEQLEKIPIDDNLKNNIITAKSLHKIALKIQ TQFIGKLLRKTDNLDEIYKAYDVLVNKDKQANLMFQHLENIRNNLLDPLKMNNTLDKLIQEFPDLDIQKLRQLIRNHHKE VEKNTTNKSFREIFKLLRGLYV
Sequences:
>Translated_182_residues MGKVIDLDEIDRLEREEENSYYKTVKSKTSVKKDALEITDFGRSLTELSKEQLEKIPIDDNLKNNIITAKSLHKIALKIQ TQFIGKLLRKTDNLDEIYKAYDVLVNKDKQANLMFQHLENIRNNLLDPLKMNNTLDKLIQEFPDLDIQKLRQLIRNHHKE VEKNTTNKSFREIFKLLRGLYV >Mature_181_residues GKVIDLDEIDRLEREEENSYYKTVKSKTSVKKDALEITDFGRSLTELSKEQLEKIPIDDNLKNNIITAKSLHKIALKIQT QFIGKLLRKTDNLDEIYKAYDVLVNKDKQANLMFQHLENIRNNLLDPLKMNNTLDKLIQEFPDLDIQKLRQLIRNHHKEV EKNTTNKSFREIFKLLRGLYV
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=154, Percent_Identity=38.961038961039, Blast_Score=101, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 21483; Mature: 21352
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVIDLDEIDRLEREEENSYYKTVKSKTSVKKDALEITDFGRSLTELSKEQLEKIPIDD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLKNNIITAKSLHKIALKIQTQFIGKLLRKTDNLDEIYKAYDVLVNKDKQANLMFQHLEN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH IRNNLLDPLKMNNTLDKLIQEFPDLDIQKLRQLIRNHHKEVEKNTTNKSFREIFKLLRGL HHHHCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YV CC >Mature Secondary Structure GKVIDLDEIDRLEREEENSYYKTVKSKTSVKKDALEITDFGRSLTELSKEQLEKIPIDD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NLKNNIITAKSLHKIALKIQTQFIGKLLRKTDNLDEIYKAYDVLVNKDKQANLMFQHLEN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH IRNNLLDPLKMNNTLDKLIQEFPDLDIQKLRQLIRNHHKEVEKNTTNKSFREIFKLLRGL HHHHCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH YV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA