Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
---|---|
Accession | NC_007880 |
Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256090
Identifier: 89256090
GI number: 89256090
Start: 688726
End: 690495
Strand: Direct
Name: 89256090
Synonym: FTL_0701
Alternate gene names: NA
Gene position: 688726-690495 (Clockwise)
Preceding gene: 89256089
Following gene: 89256093
Centisome position: 36.33
GC content: 36.27
Gene sequence:
>1770_bases ATGTACAGGAAAATTACTATCAGTTGCGTTTTGGTCTCAATATTTGCTTTAGCTAATAGTCAAACCTCAGCAAATCTTGG TGATAAAACTTTAAAATCTAATTGTCGCTGTTTACCTTCTAAGCCATGTTGGCCAGATCAACAACAATGGGATACTTTAG CAAAATCACTTAAAGGAAAGCTTATAAAACCTATATCTCCTTTCTCTGTATGTGAGAAAAATTCAGATAGTGAAGAGTGT AAATCAGTATTGCAAAATATAAAGAATCCTTTTTATATGCAGTCAGACGCGGGAAGAAATGAATCTCAAGGGTGGTATGG AGCTTGGTATAATCAATCAAGTAGCTATGCTGTTGAAGTAGAAGATACTCAAGATATTGTAAAAGCTGTCAACTTTGCTA GAGAATATAATTTGCGTATTGTTATAAAAGGAGCCGGTCATGATTATTTAGGACGATCAAGTTCTCTGGATGCGCTATTA ATATGGACTCATAATATGCGAGATATTGAGTATAATAAGCATTTTCATCCTCAGAACTGTCCAAAAAATAAAGAGTACTC AGCTGTAACAGTTGGAGCGGGAACGCGCTGGCTTGAGGCTTATAATGTTGTAACTAGTCAACATCATCAATATGTTCAAG GTGGAGGATGTACCACGGTTGGCGCTGCAGGAGGTTTTCCGCAAGGCAGTGTTTTTGGTAGCTGGTCAAAAGAGTATGGT ACTGGTGCGGGAGGTATTGTACAAGCTGAAGTTGTTACCGCTGATGGTAAGGTTGTGATTGCAAATGAATGCCAAAATCA AGATTTGTTTTGGGCTATCAAAGGTGGGGGTACTTATGGTATAGTTACTAACCTGACATTAAGAACACACAAACTCCCAA GTCACTTTGGACTGATAAGTGGAGAAATAACCGCAGATTCTGATAAGGCTTATAAAAATTTGATAAAAGAGTTTCTTTTA TTCTACTCTTCAAAGTTGAATAATGAACATTGGGGCGAACAATTTGCATTTCGTCCTAATAATAAGATAACGATAGCTAT AGTGACTCAAGGTTTAGCTGAAAAAGAAGCTTTGGATACTTGGCAGCCATTTAAAGAGTGGCTAAAGAGCCAGTCTGACA TACACTACAAGCTTAAATATATAGATATTCCACCAGCACAAATTTGGAACTATGATTTTTGGCATAAAAACTACCCTGAT ATGGTTATTAAAAATACAGCTCCAGATGCTCGAGATGGAGAATTTTGGTGGGCTTCAAATACTGGTGAAGTATCAGCTTA CTGGTACACTTATCAATCTTGGTACTTACCGGAGAAGTTATTTGATTCTAAAAATATCGACAAAACTGTGGATACTTTTT ATAAAGTTTCACAATTTGCGCCAGTATCAATTCAGATTAATAAAGGCTTAGCAGGAGCTTCTAAACAAGCTATACAATTA ACTAAACAGACATCTATGCATCCAGGTGTTTACGATGCTGGTGCTTTAGCAATTATGAGTTATAGTACTGACAAGCCACA GTTTGGTAAGCCAAAGATGACTCCAGAGATTAAACAGAAAGTAGATGATATCTACAAAGCTATGAACATGATTATAGCTT TAGCTCCTGATGCTGGGACATATGCAAATGAAGCTGATTACTTCCAAAAAAACTGGCAGCAAGTATTTTGGGGTAGTAAT TACTCTAAATTACTTAAGATTAAAAACAAATATGATCCAAATGGTCTATTTTATTGTCATCATTGTGTTGGTAGTGAATA TTGGCAATAG
Upstream 100 bases:
>100_bases TTTAGTTCAAAAACTTATTCTATATTAAGATTTAATAGCTTTTTTTTGAAGTATTAATCATTTAGTATGTTTGTTATCAT CTAATAATTTCTTGGTAAAA
Downstream 100 bases:
>100_bases GATGGCATGTGTCGAAAGTGATTCTTAGATTCAGCTAATTAATTTTAGAAATTTAGTCATTAGTTCATTCTTCTTTAGGC AAAACATTACTTAAGTTTTC
Product: FAD binding family protein
Products: NA
Alternate protein names: FAD Linked Oxidase Domain Protein; Lipoprotein; Oxidoreductase; 6-Hydroxy-D-Nicotine Oxidase; FAD/FMN-Containing Oxidoreductase; MitR Protein; Twin-Arginine Translocation Pathway Signal; FAD Linked Oxidase N-Terminal; Reticuline Oxidase; FAD Linked Oxidase; Berberine Family Protein; Oxidoreductase Oxygen Dependent FAD-Dependent Protein; FAD Linked Oxidase Domain Containing Protein; Berberine Bridge Protein; Fad/Fmn-Containing Dehydrogenase Protein
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MYRKITISCVLVSIFALANSQTSANLGDKTLKSNCRCLPSKPCWPDQQQWDTLAKSLKGKLIKPISPFSVCEKNSDSEEC KSVLQNIKNPFYMQSDAGRNESQGWYGAWYNQSSSYAVEVEDTQDIVKAVNFAREYNLRIVIKGAGHDYLGRSSSLDALL IWTHNMRDIEYNKHFHPQNCPKNKEYSAVTVGAGTRWLEAYNVVTSQHHQYVQGGGCTTVGAAGGFPQGSVFGSWSKEYG TGAGGIVQAEVVTADGKVVIANECQNQDLFWAIKGGGTYGIVTNLTLRTHKLPSHFGLISGEITADSDKAYKNLIKEFLL FYSSKLNNEHWGEQFAFRPNNKITIAIVTQGLAEKEALDTWQPFKEWLKSQSDIHYKLKYIDIPPAQIWNYDFWHKNYPD MVIKNTAPDARDGEFWWASNTGEVSAYWYTYQSWYLPEKLFDSKNIDKTVDTFYKVSQFAPVSIQINKGLAGASKQAIQL TKQTSMHPGVYDAGALAIMSYSTDKPQFGKPKMTPEIKQKVDDIYKAMNMIIALAPDAGTYANEADYFQKNWQQVFWGSN YSKLLKIKNKYDPNGLFYCHHCVGSEYWQ
Sequences:
>Translated_589_residues MYRKITISCVLVSIFALANSQTSANLGDKTLKSNCRCLPSKPCWPDQQQWDTLAKSLKGKLIKPISPFSVCEKNSDSEEC KSVLQNIKNPFYMQSDAGRNESQGWYGAWYNQSSSYAVEVEDTQDIVKAVNFAREYNLRIVIKGAGHDYLGRSSSLDALL IWTHNMRDIEYNKHFHPQNCPKNKEYSAVTVGAGTRWLEAYNVVTSQHHQYVQGGGCTTVGAAGGFPQGSVFGSWSKEYG TGAGGIVQAEVVTADGKVVIANECQNQDLFWAIKGGGTYGIVTNLTLRTHKLPSHFGLISGEITADSDKAYKNLIKEFLL FYSSKLNNEHWGEQFAFRPNNKITIAIVTQGLAEKEALDTWQPFKEWLKSQSDIHYKLKYIDIPPAQIWNYDFWHKNYPD MVIKNTAPDARDGEFWWASNTGEVSAYWYTYQSWYLPEKLFDSKNIDKTVDTFYKVSQFAPVSIQINKGLAGASKQAIQL TKQTSMHPGVYDAGALAIMSYSTDKPQFGKPKMTPEIKQKVDDIYKAMNMIIALAPDAGTYANEADYFQKNWQQVFWGSN YSKLLKIKNKYDPNGLFYCHHCVGSEYWQ >Mature_589_residues MYRKITISCVLVSIFALANSQTSANLGDKTLKSNCRCLPSKPCWPDQQQWDTLAKSLKGKLIKPISPFSVCEKNSDSEEC KSVLQNIKNPFYMQSDAGRNESQGWYGAWYNQSSSYAVEVEDTQDIVKAVNFAREYNLRIVIKGAGHDYLGRSSSLDALL IWTHNMRDIEYNKHFHPQNCPKNKEYSAVTVGAGTRWLEAYNVVTSQHHQYVQGGGCTTVGAAGGFPQGSVFGSWSKEYG TGAGGIVQAEVVTADGKVVIANECQNQDLFWAIKGGGTYGIVTNLTLRTHKLPSHFGLISGEITADSDKAYKNLIKEFLL FYSSKLNNEHWGEQFAFRPNNKITIAIVTQGLAEKEALDTWQPFKEWLKSQSDIHYKLKYIDIPPAQIWNYDFWHKNYPD MVIKNTAPDARDGEFWWASNTGEVSAYWYTYQSWYLPEKLFDSKNIDKTVDTFYKVSQFAPVSIQINKGLAGASKQAIQL TKQTSMHPGVYDAGALAIMSYSTDKPQFGKPKMTPEIKQKVDDIYKAMNMIIALAPDAGTYANEADYFQKNWQQVFWGSN YSKLLKIKNKYDPNGLFYCHHCVGSEYWQ
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66560; Mature: 66560
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRKITISCVLVSIFALANSQTSANLGDKTLKSNCRCLPSKPCWPDQQQWDTLAKSLKGK CCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC LIKPISPFSVCEKNSDSEECKSVLQNIKNPFYMQSDAGRNESQGWYGAWYNQSSSYAVEV CCCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEE EDTQDIVKAVNFAREYNLRIVIKGAGHDYLGRSSSLDALLIWTHNMRDIEYNKHFHPQNC CCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC PKNKEYSAVTVGAGTRWLEAYNVVTSQHHQYVQGGGCTTVGAAGGFPQGSVFGSWSKEYG CCCCCCCEEEECCCCHHHHHHHHHHHHCHHEECCCCCEEECCCCCCCCCCCCCCCCHHCC TGAGGIVQAEVVTADGKVVIANECQNQDLFWAIKGGGTYGIVTNLTLRTHKLPSHFGLIS CCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCEEE GEITADSDKAYKNLIKEFLLFYSSKLNNEHWGEQFAFRPNNKITIAIVTQGLAEKEALDT CEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHH WQPFKEWLKSQSDIHYKLKYIDIPPAQIWNYDFWHKNYPDMVIKNTAPDARDGEFWWASN HHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECC TGEVSAYWYTYQSWYLPEKLFDSKNIDKTVDTFYKVSQFAPVSIQINKGLAGASKQAIQL CCCEEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH TKQTSMHPGVYDAGALAIMSYSTDKPQFGKPKMTPEIKQKVDDIYKAMNMIIALAPDAGT HHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCC YANEADYFQKNWQQVFWGSNYSKLLKIKNKYDPNGLFYCHHCVGSEYWQ CCCCHHHHHHHHHHEECCCCHHHHHEECCCCCCCCEEEEEECCCCCCCC >Mature Secondary Structure MYRKITISCVLVSIFALANSQTSANLGDKTLKSNCRCLPSKPCWPDQQQWDTLAKSLKGK CCEEEEHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCC LIKPISPFSVCEKNSDSEECKSVLQNIKNPFYMQSDAGRNESQGWYGAWYNQSSSYAVEV CCCCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEE EDTQDIVKAVNFAREYNLRIVIKGAGHDYLGRSSSLDALLIWTHNMRDIEYNKHFHPQNC CCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC PKNKEYSAVTVGAGTRWLEAYNVVTSQHHQYVQGGGCTTVGAAGGFPQGSVFGSWSKEYG CCCCCCCEEEECCCCHHHHHHHHHHHHCHHEECCCCCEEECCCCCCCCCCCCCCCCHHCC TGAGGIVQAEVVTADGKVVIANECQNQDLFWAIKGGGTYGIVTNLTLRTHKLPSHFGLIS CCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCEEE GEITADSDKAYKNLIKEFLLFYSSKLNNEHWGEQFAFRPNNKITIAIVTQGLAEKEALDT CEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHH WQPFKEWLKSQSDIHYKLKYIDIPPAQIWNYDFWHKNYPDMVIKNTAPDARDGEFWWASN HHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECC TGEVSAYWYTYQSWYLPEKLFDSKNIDKTVDTFYKVSQFAPVSIQINKGLAGASKQAIQL CCCEEEEEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH TKQTSMHPGVYDAGALAIMSYSTDKPQFGKPKMTPEIKQKVDDIYKAMNMIIALAPDAGT HHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCC YANEADYFQKNWQQVFWGSNYSKLLKIKNKYDPNGLFYCHHCVGSEYWQ CCCCHHHHHHHHHHEECCCCHHHHHEECCCCCCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA