Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is 89256083
Identifier: 89256083
GI number: 89256083
Start: 682529
End: 683227
Strand: Reverse
Name: 89256083
Synonym: FTL_0694
Alternate gene names: NA
Gene position: 683227-682529 (Counterclockwise)
Preceding gene: 89256084
Following gene: 89256081
Centisome position: 36.04
GC content: 27.75
Gene sequence:
>699_bases ATGAAAAAATATTTATTATTAACTATATTATTCTTACCTTTGCAATTATTTGCTTTTTCATTTTTTGGCGATCCTGTAAA GGTACCAGAACAAAAAGAATACGTTATCTACAGTAAACAAATAGAATCTAAACCATTACCAGATACTGAGAACGCTGATA TTAGTACGACTTTACTAGTATATAATATCCAAACTCAAGCATCGACATCAACACAAATGTTTTATCTAAAAGGTAATCGT CTTTATACATTTAAAAATAGTTCTTGGGCAATGCCAGTATCAAAAATGCTTACTGTAGCAACCTTTGAATATATTCTAGA TCATAATATAGTTAATAATCTTGCTTTCCAGGATATTAACATTCGACAAGATTTTACCCTATCAGGGACAACTACTTATG GACCAATATTAGATTTAGATAATAAACAATTTTACTTTTATATAACCTTTTACCTGAAAAATGAAAAAACAGGCTTTACA AAGATAACAACAATTAAATATCATCAAAAAATTCCGGATGATAACATAGATGCGAACTTATATGCTGAAATGACGAATAC CGCATTGACAAATATTTTTTCTCAACTTAAGCCTTGGCTAATTGAAAATCTAAAAATTCAAAAACATAGAAATAAAGAAA TCCAAGCCAATCATAAAAATACTCAGAATTTCTTCAAACCTTTATTAGCTAAGAAATAA
Upstream 100 bases:
>100_bases GAAAGTCAAGAAAATATCACAAGGCTTAACAATGTTATTAGAATATTAGAATATGATCCTTCAACTATTGTCAGAGGCGT AGACCATAAGGAATAAAACC
Downstream 100 bases:
>100_bases AGCTAGCTGCTAAACCTATTAATCCACCAAATACTCCACCCCACACGACTAGCCAACCTAGATGTTCACGGATAATCTTT TGAATTATCTCTTTAACCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKKYLLLTILFLPLQLFAFSFFGDPVKVPEQKEYVIYSKQIESKPLPDTENADISTTLLVYNIQTQASTSTQMFYLKGNR LYTFKNSSWAMPVSKMLTVATFEYILDHNIVNNLAFQDINIRQDFTLSGTTTYGPILDLDNKQFYFYITFYLKNEKTGFT KITTIKYHQKIPDDNIDANLYAEMTNTALTNIFSQLKPWLIENLKIQKHRNKEIQANHKNTQNFFKPLLAKK
Sequences:
>Translated_232_residues MKKYLLLTILFLPLQLFAFSFFGDPVKVPEQKEYVIYSKQIESKPLPDTENADISTTLLVYNIQTQASTSTQMFYLKGNR LYTFKNSSWAMPVSKMLTVATFEYILDHNIVNNLAFQDINIRQDFTLSGTTTYGPILDLDNKQFYFYITFYLKNEKTGFT KITTIKYHQKIPDDNIDANLYAEMTNTALTNIFSQLKPWLIENLKIQKHRNKEIQANHKNTQNFFKPLLAKK >Mature_232_residues MKKYLLLTILFLPLQLFAFSFFGDPVKVPEQKEYVIYSKQIESKPLPDTENADISTTLLVYNIQTQASTSTQMFYLKGNR LYTFKNSSWAMPVSKMLTVATFEYILDHNIVNNLAFQDINIRQDFTLSGTTTYGPILDLDNKQFYFYITFYLKNEKTGFT KITTIKYHQKIPDDNIDANLYAEMTNTALTNIFSQLKPWLIENLKIQKHRNKEIQANHKNTQNFFKPLLAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27133; Mature: 27133
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLLLTILFLPLQLFAFSFFGDPVKVPEQKEYVIYSKQIESKPLPDTENADISTTLLV CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE YNIQTQASTSTQMFYLKGNRLYTFKNSSWAMPVSKMLTVATFEYILDHNIVNNLAFQDIN EEEECCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC IRQDFTLSGTTTYGPILDLDNKQFYFYITFYLKNEKTGFTKITTIKYHQKIPDDNIDANL CCCCEEECCCCCCCCEEECCCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEE YAEMTNTALTNIFSQLKPWLIENLKIQKHRNKEIQANHKNTQNFFKPLLAKK EEHHHHHHHHHHHHHHCHHHHHCEEEECCCCCCEECCCCCHHHHHHHHHCCC >Mature Secondary Structure MKKYLLLTILFLPLQLFAFSFFGDPVKVPEQKEYVIYSKQIESKPLPDTENADISTTLLV CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEE YNIQTQASTSTQMFYLKGNRLYTFKNSSWAMPVSKMLTVATFEYILDHNIVNNLAFQDIN EEEECCCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC IRQDFTLSGTTTYGPILDLDNKQFYFYITFYLKNEKTGFTKITTIKYHQKIPDDNIDANL CCCCEEECCCCCCCCEEECCCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEE YAEMTNTALTNIFSQLKPWLIENLKIQKHRNKEIQANHKNTQNFFKPLLAKK EEHHHHHHHHHHHHHHCHHHHHCEEEECCCCCCEECCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA