| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
Click here to switch to the map view.
The map label for this gene is 89256037
Identifier: 89256037
GI number: 89256037
Start: 628660
End: 629469
Strand: Reverse
Name: 89256037
Synonym: FTL_0646
Alternate gene names: NA
Gene position: 629469-628660 (Counterclockwise)
Preceding gene: 89256038
Following gene: 89256035
Centisome position: 33.2
GC content: 29.01
Gene sequence:
>810_bases TTGAAACACTACTTTGACGGAGTTGTCGCAGGCGAAACAATCTTCGAAGCAAAATATGGTGTTTCTGGTACTAGCAATTT TGTGGCTGATAATTATATAAAGAATCTTGCCAATATCAGAGGAGATAGAGGTATTTATAAACCATCTGAAAATGAAGTTG TTATTTATAGTTATAAAGATGGAAAGAGATTATCTTTTAGAGCCAAAAACTATGGACAATATATGACTATTGTTGAAAAT ATTACAAAATATGCAAATGAATATTTTGATAAAAAAATAATAAAGATTTTATATGGAGAAACTGTAATATCATCAAATAA TGCGTCTCATGCTGTGCTTCTTGAAGTAACTATTGATAATTATGATAAAACAATAACTCTAAATATGGTTGATTCTCTAA TATCACATGCTGCAAATAATGCCAGTTTTTCTGTATTACAATCGTTAAAGCAAGGACTTGAAAGAGTAAATTCATATATT GCATATATTGATACTACAAAAGCAAAAAATGATGTTCATAATATACCAAAGATTGCTAATAGTACATACAAAGTAGAAAT CTCTTTGGATAACATACATCTTCAAATGCCTTTACAAACAGATTGTGGCAGATATGTCGCGATTTGGATTAATGCTATTA TTAATGGGATAGATTATAGAAAACTAAATTCTACAGATTATAATAAAACCTTAACAATTCTAAATTCTGCTAAAAAATTA GCTCTTCAAGATAATAGTTATGCTTCAAAGTCTCTTAATTCAGCAGAGCAAAAACCACAGGTACTAAGTCTAGCGATATT GATGGTCTAG
Upstream 100 bases:
>100_bases TAATAAAGAAATTTTAAGTGTTAACAGCTATCTTAAAAAGAATGCTAATACAATAAATAAAAGGACAGAAACTTATTTAG TTGAAAAGATTTATGGAGGA
Downstream 100 bases:
>100_bases GTTTTGATAATATTGATGACCTAGATATATTAAATGAAAACTTAGTAGAACCAAAGCTTATAGAGAGAGAAGAAATGTTA AGAAATATTTTTGAGATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKHYFDGVVAGETIFEAKYGVSGTSNFVADNYIKNLANIRGDRGIYKPSENEVVIYSYKDGKRLSFRAKNYGQYMTIVEN ITKYANEYFDKKIIKILYGETVISSNNASHAVLLEVTIDNYDKTITLNMVDSLISHAANNASFSVLQSLKQGLERVNSYI AYIDTTKAKNDVHNIPKIANSTYKVEISLDNIHLQMPLQTDCGRYVAIWINAIINGIDYRKLNSTDYNKTLTILNSAKKL ALQDNSYASKSLNSAEQKPQVLSLAILMV
Sequences:
>Translated_269_residues MKHYFDGVVAGETIFEAKYGVSGTSNFVADNYIKNLANIRGDRGIYKPSENEVVIYSYKDGKRLSFRAKNYGQYMTIVEN ITKYANEYFDKKIIKILYGETVISSNNASHAVLLEVTIDNYDKTITLNMVDSLISHAANNASFSVLQSLKQGLERVNSYI AYIDTTKAKNDVHNIPKIANSTYKVEISLDNIHLQMPLQTDCGRYVAIWINAIINGIDYRKLNSTDYNKTLTILNSAKKL ALQDNSYASKSLNSAEQKPQVLSLAILMV >Mature_269_residues MKHYFDGVVAGETIFEAKYGVSGTSNFVADNYIKNLANIRGDRGIYKPSENEVVIYSYKDGKRLSFRAKNYGQYMTIVEN ITKYANEYFDKKIIKILYGETVISSNNASHAVLLEVTIDNYDKTITLNMVDSLISHAANNASFSVLQSLKQGLERVNSYI AYIDTTKAKNDVHNIPKIANSTYKVEISLDNIHLQMPLQTDCGRYVAIWINAIINGIDYRKLNSTDYNKTLTILNSAKKL ALQDNSYASKSLNSAEQKPQVLSLAILMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30227; Mature: 30227
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHYFDGVVAGETIFEAKYGVSGTSNFVADNYIKNLANIRGDRGIYKPSENEVVIYSYKD CCCHHCCEECCCHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC GKRLSFRAKNYGQYMTIVENITKYANEYFDKKIIKILYGETVISSNNASHAVLLEVTIDN CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEECC YDKTITLNMVDSLISHAANNASFSVLQSLKQGLERVNSYIAYIDTTKAKNDVHNIPKIAN CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHCHHHCC STYKVEISLDNIHLQMPLQTDCGRYVAIWINAIINGIDYRKLNSTDYNKTLTILNSAKKL CEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCEEEEEHHHHHE ALQDNSYASKSLNSAEQKPQVLSLAILMV EECCCCHHHHHCCCHHCCCHHEEEEEEEC >Mature Secondary Structure MKHYFDGVVAGETIFEAKYGVSGTSNFVADNYIKNLANIRGDRGIYKPSENEVVIYSYKD CCCHHCCEECCCHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC GKRLSFRAKNYGQYMTIVENITKYANEYFDKKIIKILYGETVISSNNASHAVLLEVTIDN CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEEEEECC YDKTITLNMVDSLISHAANNASFSVLQSLKQGLERVNSYIAYIDTTKAKNDVHNIPKIAN CCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHCHHHCC STYKVEISLDNIHLQMPLQTDCGRYVAIWINAIINGIDYRKLNSTDYNKTLTILNSAKKL CEEEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCEEEEEHHHHHE ALQDNSYASKSLNSAEQKPQVLSLAILMV EECCCCHHHHHCCCHHCCCHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA