| Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
|---|---|
| Accession | NC_007880 |
| Length | 1,895,994 |
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The map label for this gene is rmlA2 [H]
Identifier: 89256003
GI number: 89256003
Start: 593156
End: 594040
Strand: Direct
Name: rmlA2 [H]
Synonym: FTL_0605
Alternate gene names: 89256003
Gene position: 593156-594040 (Clockwise)
Preceding gene: 89256002
Following gene: 89256004
Centisome position: 31.28
GC content: 38.19
Gene sequence:
>885_bases ATGAAGGGAATAATTCTAGCTGGTGGCAGTGGTACAAGGCTATATCCACTTACCTTGGGTGTTAGCAAACAGCTGCTACC TGTTTATGATAAGCCATTGTTATACTATCCACTATCTGTGCTTATGCTTGCAGGTATTAGGGAGATATTAATTATCTCTA CAGTGCGTGATATCTCACTTATCCAAGAGCTTCTTGGTGATGGTTTACAATTTGGTATACAGTTGAGTTATAAAATCCAG CCATCACCAGATGGGCTTGCTCAAGCATTTATTCTTGGTGAGGAGTTTTTGGCGGGTGACTCAGCTTGTTTGATATTAGG AGATAATATCTACTATGGTCAAGGTATGACTACAATGCTAGAATCTGCAAGAGCACAGTGTGGAGGTCCAGTTGGTGGCG CTTGTGTTTTTGGTTATTATGTTAATGATCCGCATAGATATGGTATAGTCGAATTTGATAAGCAAAAAAATGTAATTTCG GTAGAGGAAAAGCCACAGAATCCTAAGTCACACTATGCTATCACAGGTTTATATTTTTATGATAATAATGTTGTTGAGTA TGCTAAACAAGTCAAACCATCTGCACGTGGTGAGCTAGAGATTACTTCACTTAATGAGTTATATCTAAAAGAAAATAAGC TAAATGTCGAACTCTTAGGGCGTGGCTTTGCTTGGCTTGATGCTGGTACGCATGATTCATTGCTAGAGGCAGGTCAATAT GTCGCAACTATTGAGAAAAGACAAGGGCTTAAAATTGCATGTTTGGAAGAAATTGCATGGCGTAAAGGCTTTATCTCAAC ACAACAAGTTCTAGCTCAAGCTGAAAAACTTTCTAAGACAGAGTATGGTCAGTATCTGAAGAATTTAATTAAGGATGGTT TATAA
Upstream 100 bases:
>100_bases TCGTCTATTCAAAATTTTAATTAGATCAAGATGTATTCCATTAATAAGTTGGTTTAAATATAGATTTGAAAAATAAATAT CATTTAGAGGATTATGTGAA
Downstream 100 bases:
>100_bases ATTAATCCGTCATACCCATGAAGGTGGGTATCTCATAAAAGTTGGATATGTTTTGGAGATTCCAATCTGCGCAGTAATGA CAGGTTTGGTAATATATAGC
Product: glucose-1-phosphate thymidylyltransferase
Products: NA
Alternate protein names: G1P-TT 2; dTDP-glucose pyrophosphorylase 2; dTDP-glucose synthase 2 [H]
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKGIILAGGSGTRLYPLTLGVSKQLLPVYDKPLLYYPLSVLMLAGIREILIISTVRDISLIQELLGDGLQFGIQLSYKIQ PSPDGLAQAFILGEEFLAGDSACLILGDNIYYGQGMTTMLESARAQCGGPVGGACVFGYYVNDPHRYGIVEFDKQKNVIS VEEKPQNPKSHYAITGLYFYDNNVVEYAKQVKPSARGELEITSLNELYLKENKLNVELLGRGFAWLDAGTHDSLLEAGQY VATIEKRQGLKIACLEEIAWRKGFISTQQVLAQAEKLSKTEYGQYLKNLIKDGL
Sequences:
>Translated_294_residues MKGIILAGGSGTRLYPLTLGVSKQLLPVYDKPLLYYPLSVLMLAGIREILIISTVRDISLIQELLGDGLQFGIQLSYKIQ PSPDGLAQAFILGEEFLAGDSACLILGDNIYYGQGMTTMLESARAQCGGPVGGACVFGYYVNDPHRYGIVEFDKQKNVIS VEEKPQNPKSHYAITGLYFYDNNVVEYAKQVKPSARGELEITSLNELYLKENKLNVELLGRGFAWLDAGTHDSLLEAGQY VATIEKRQGLKIACLEEIAWRKGFISTQQVLAQAEKLSKTEYGQYLKNLIKDGL >Mature_294_residues MKGIILAGGSGTRLYPLTLGVSKQLLPVYDKPLLYYPLSVLMLAGIREILIISTVRDISLIQELLGDGLQFGIQLSYKIQ PSPDGLAQAFILGEEFLAGDSACLILGDNIYYGQGMTTMLESARAQCGGPVGGACVFGYYVNDPHRYGIVEFDKQKNVIS VEEKPQNPKSHYAITGLYFYDNNVVEYAKQVKPSARGELEITSLNELYLKENKLNVELLGRGFAWLDAGTHDSLLEAGQY VATIEKRQGLKIACLEEIAWRKGFISTQQVLAQAEKLSKTEYGQYLKNLIKDGL
Specific function: Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis [H]
COG id: COG1209
COG function: function code M; dTDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate thymidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=241, Percent_Identity=27.3858921161826, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI11761621, Length=241, Percent_Identity=27.3858921161826, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1790224, Length=291, Percent_Identity=66.6666666666667, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI1788351, Length=291, Percent_Identity=63.9175257731959, Blast_Score=395, Evalue=1e-111, Organism=Caenorhabditis elegans, GI133931050, Length=240, Percent_Identity=27.9166666666667, Blast_Score=84, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6320148, Length=279, Percent_Identity=25.4480286738351, Blast_Score=83, Evalue=4e-17, Organism=Drosophila melanogaster, GI21355443, Length=253, Percent_Identity=26.4822134387352, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI24644084, Length=253, Percent_Identity=26.4822134387352, Blast_Score=85, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005907 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.24 [H]
Molecular weight: Translated: 32457; Mature: 32457
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGIILAGGSGTRLYPLTLGVSKQLLPVYDKPLLYYPLSVLMLAGIREILIISTVRDISL CCCEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQELLGDGLQFGIQLSYKIQPSPDGLAQAFILGEEFLAGDSACLILGDNIYYGQGMTTML HHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCHHHHH ESARAQCGGPVGGACVFGYYVNDPHRYGIVEFDKQKNVISVEEKPQNPKSHYAITGLYFY HHHHHHCCCCCCCEEEEEEEECCCCEECCEEECCCCCEEEECCCCCCCCCCEEEEEEEEE DNNVVEYAKQVKPSARGELEITSLNELYLKENKLNVELLGRGFAWLDAGTHDSLLEAGQY CCCHHHHHHHCCCCCCCCEEEEECCEEEEECCCCEEEEEECCEEEEECCCCHHHHHCCHH VATIEKRQGLKIACLEEIAWRKGFISTQQVLAQAEKLSKTEYGQYLKNLIKDGL EEEHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKGIILAGGSGTRLYPLTLGVSKQLLPVYDKPLLYYPLSVLMLAGIREILIISTVRDISL CCCEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQELLGDGLQFGIQLSYKIQPSPDGLAQAFILGEEFLAGDSACLILGDNIYYGQGMTTML HHHHHCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCEEECCCHHHHH ESARAQCGGPVGGACVFGYYVNDPHRYGIVEFDKQKNVISVEEKPQNPKSHYAITGLYFY HHHHHHCCCCCCCEEEEEEEECCCCEECCEEECCCCCEEEECCCCCCCCCCEEEEEEEEE DNNVVEYAKQVKPSARGELEITSLNELYLKENKLNVELLGRGFAWLDAGTHDSLLEAGQY CCCHHHHHHHCCCCCCCCEEEEECCEEEEECCCCEEEEEECCEEEEECCCCHHHHHCCHH VATIEKRQGLKIACLEEIAWRKGFISTQQVLAQAEKLSKTEYGQYLKNLIKDGL EEEHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 7559340 [H]