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The map label for this gene is ywhC [H]

Identifier: 89255858

GI number: 89255858

Start: 423165

End: 423821

Strand: Reverse

Name: ywhC [H]

Synonym: FTL_0448

Alternate gene names: 89255858

Gene position: 423821-423165 (Counterclockwise)

Preceding gene: 89255860

Following gene: 89255857

Centisome position: 22.35

GC content: 29.98

Gene sequence:

>657_bases
ATGGATTTTAATCATATTTTAATGGTCGCATTAATGGCTGCTATTCCACTGATTTTTGCAATTACTATCCATGAGGCTGC
TCATGCTTTTGTAGCTAAAATTCGTGGTGATGATAGCGCCTATAGATTGGGTAGAGTAACATTAAACCCTGTATCTCATA
TTGATCCTATTGGCACTATTGTATTTCCTGGATTAATGCTTATTTCATCAATTTCATTTGGATTTCCTTTTATTTTTGGT
TGGGCAAAACCTGTTCCTATTGACTATACCAAACTTAAAAGACCTAAGATAGATACTATATCAGTTGCCATTGCAGGACC
ATTAGCAAACTTAGCAATGGCTTTTATTTGGGCAATAGTAGCAAAATATATTACTCTTCATCCATACATCCAAGGAATGG
CTTTTTATGGAATAATGATCAACGTAGTATTGATGATATTAAATTTACTACCAATACCTCCATTAGATGGTAGTAGAATA
ATTTCATCTTTATTACCTATAAATTTAGCATATAAGTACAATAGTATAGAAAAATATGGCTTTCTTATAATTTTGGCACT
AGTTATTATACCTTTTAATGGTTCAAACTTATTGTTTTTTATAATGCAACCGTTTATAACAACAATTATAAACTTAATTC
AATTTATAATTTTCTAA

Upstream 100 bases:

>100_bases
TTTACATTTTTTAATCATTTTATTTATTTTGAACTTCATATTCAGTGACACAATCTCTATAATTCAATAATTACTAAATA
TTCTTGTTTTATAGCTCTGA

Downstream 100 bases:

>100_bases
GAGATATTATTTCTTAATATTTAAGAATTACTTTTGAAAACAATTATTTATTTTGAAAACAATTATTTAGTAAATTTGGC
ATATAGTTACTTATTTAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MDFNHILMVALMAAIPLIFAITIHEAAHAFVAKIRGDDSAYRLGRVTLNPVSHIDPIGTIVFPGLMLISSISFGFPFIFG
WAKPVPIDYTKLKRPKIDTISVAIAGPLANLAMAFIWAIVAKYITLHPYIQGMAFYGIMINVVLMILNLLPIPPLDGSRI
ISSLLPINLAYKYNSIEKYGFLIILALVIIPFNGSNLLFFIMQPFITTIINLIQFIIF

Sequences:

>Translated_218_residues
MDFNHILMVALMAAIPLIFAITIHEAAHAFVAKIRGDDSAYRLGRVTLNPVSHIDPIGTIVFPGLMLISSISFGFPFIFG
WAKPVPIDYTKLKRPKIDTISVAIAGPLANLAMAFIWAIVAKYITLHPYIQGMAFYGIMINVVLMILNLLPIPPLDGSRI
ISSLLPINLAYKYNSIEKYGFLIILALVIIPFNGSNLLFFIMQPFITTIINLIQFIIF
>Mature_218_residues
MDFNHILMVALMAAIPLIFAITIHEAAHAFVAKIRGDDSAYRLGRVTLNPVSHIDPIGTIVFPGLMLISSISFGFPFIFG
WAKPVPIDYTKLKRPKIDTISVAIAGPLANLAMAFIWAIVAKYITLHPYIQGMAFYGIMINVVLMILNLLPIPPLDGSRI
ISSLLPINLAYKYNSIEKYGFLIILALVIIPFNGSNLLFFIMQPFITTIINLIQFIIF

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M50B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008915 [H]

Pfam domain/function: PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 24220; Mature: 24220

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNHILMVALMAAIPLIFAITIHEAAHAFVAKIRGDDSAYRLGRVTLNPVSHIDPIGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECCHHHCCHHHHH
VFPGLMLISSISFGFPFIFGWAKPVPIDYTKLKRPKIDTISVAIAGPLANLAMAFIWAIV
HHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
AKYITLHPYIQGMAFYGIMINVVLMILNLLPIPPLDGSRIISSLLPINLAYKYNSIEKYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHEEEECCCHHHHH
FLIILALVIIPFNGSNLLFFIMQPFITTIINLIQFIIF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDFNHILMVALMAAIPLIFAITIHEAAHAFVAKIRGDDSAYRLGRVTLNPVSHIDPIGTI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEECCHHHCCHHHHH
VFPGLMLISSISFGFPFIFGWAKPVPIDYTKLKRPKIDTISVAIAGPLANLAMAFIWAIV
HHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHH
AKYITLHPYIQGMAFYGIMINVVLMILNLLPIPPLDGSRIISSLLPINLAYKYNSIEKYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHEEEECCCHHHHH
FLIILALVIIPFNGSNLLFFIMQPFITTIINLIQFIIF
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]