Definition | Francisella tularensis subsp. holarctica LVS chromosome, complete genome. |
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Accession | NC_007880 |
Length | 1,895,994 |
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The map label for this gene is metG [H]
Identifier: 89255854
GI number: 89255854
Start: 412077
End: 414101
Strand: Reverse
Name: metG [H]
Synonym: FTL_0444
Alternate gene names: 89255854
Gene position: 414101-412077 (Counterclockwise)
Preceding gene: 89255855
Following gene: 89255853
Centisome position: 21.84
GC content: 34.07
Gene sequence:
>2025_bases ATGCGAAAGATACTCGTTACTAATGCTCTGCCATATGCTAATGGTGACTTACATTTAGGTCACATGCTCGGCTATATACA ATCCGACATCTGGGTCAGATTCCAAAAACTACAAGGCAATCAATGCATATTTGTCTGTGGTAGTGATACTCATGGTACGC CAATAATGCTCAAAGCAAAGAGTCTTGGAATTACTCCAGAAGAGTTAGTTACAAAATACTCTAATAGACACTTACAAGAT TTTACTGATTTTGAAATTAATTTTGACAATTATCACTCTACTCATAATTCTCTAAATAAAGAGATTGTTGAAGATATATA TAATAAACTTAACAATAAAAATCTTATTTCAAAAAAAGCAATAGCTCAAGCTTATGACCCTGAGGCTAAAATGTTTTTGC CAGATAGATTTGTCAAGGGAACTTGTCCAAAATGTAAAGCTGAAGATCAGTATGGTGATAGCTGTGAAGTTTGTGGTGCC ACATATGATCCTACAGAGCTTATCAATCCAAGATCTGTAATATCTGGTCAATCGCCAATACAAAAAAACTCTGAACATTT CTTTTTTGACTTACCCGCATTAGAAAAAAATATAAAAGATTGGATAGAATCTAATACACTCTTACAACCAGAAGTTGCTA ACAAACTAGCAGAATGGTTTGAGCAAGGCTTACAAAGTTGGGATATCTCGCGTGATGCGCCATATTTTGGCTTTGCAATC CCAGGTACAAATGAACAAAAATTCTTCTATGTGTGGCTAGATGCTCCAATGGGCTATATTGCAAGCTTCAAAGATTATTG TAATAAAAATAATATTAATTTTGGTGATTTCTGGGGAGATAGTTCTAGTGAAAGTGAGCTTTATCATTTTATTGGTAAAG ATATTATTTATTTTCATGCACTATTTTGGCCAGCAATATTATCATCTACTGGTTATAAGACACCTACTAGTGTATTTGCT AATGGTTTCTTAACTGTAAATGGTAAGAAGATGTCAAAATCTCGAGGGACGTTCATTCAAGCTAGAACTTACCTAGATAA TTTAGAGCCTAGTTATTTAAGATACTACTTTGCGTCAAGATTGACATCCCGCATTGATGATATAGATTTGAATCTAGAGG AATTTGTTACTAAATCAAATTCTGATATAGTAGGTAAGGTAGTCAATATTGCCAGTCGTTGTGCTGGATTTATATACAAA AAATTTGATGCTACCTTGTCTGGAGAGATTTTTGATCCAGAATTAGAAAGTGAATTTAGTAAAAACCACGATGCTATAAC ACAAGCTTTTGAGAAAAGAGAGTTTGCCCACGCTGTGAGACTGATAATGGCATTAGCCGATAAAGCTAATCAATTTATAG ATTACCATAAACCTTGGCAACTAGCTAAAGAAGAAGGACAAGAACAAAAAGTTCATCAAGTCTGTTCACAAGGTATAAAT ATGTTTAAGGTTTTAATCGCTTATCTTAAGCCTATTATTCCTAGCATTGTTGCTGAGACAGAGAGATTTTTAAATATACA GTTCATAAGCTGGGCTGATGCTCCAAAGTTTTTAATAAATCATAAAATAGATAAATTCAAACCTCTAGCCACTCGTATCG AAAAAGAAAAAGTAGACAAAATTTTAGAGGATACAAAGAAAATGTTTGAAAATGAACAAGCTCCGCAATCTAAAAAAGAA GAGCCTAAACTAGATATCGCAGCTGAATGTACTTTTGATGATTTTATGAAAGTAGATTTGCGTATAGCTAAAATTACTGA AGCTTCACATGTTGAAGGTGCGGATAAATTACTTAAACTAATATTGGATCTAGGTGGTGTCACCAAACAAGTTTTTGCTG GTATCAAGTCTGCTTACAAACCTGAAGATTTAATTGGCAAGCATACTATAATGGTAGCAAATCTAGCTCCTAGAAAAATG AAATTTGGAATGTCTGAGGGCATGGTTTTAGCTGCTGGAGATGGTAAAGGTATATATATACTTGAGCCACATGAGGGTGC TCAACCAGGTATGCGTGTCAAATAA
Upstream 100 bases:
>100_bases CAATTTTAGCAGTATTAATGCACAATTTAGCTAAACAAAATAGTTAAAAAACTTTATAATAACAGAATCATTGTTAATAA ATTGATATTATAATCAAAAA
Downstream 100 bases:
>100_bases TATAAGCTCTCCCACAATGAAAAAATATTACTACAATACTTTAATAATTCTTTTACTGTTCTTTTTGGCATTACTAAATT ATGTTGACAGATCAACTCTA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 674; Mature: 674
Protein sequence:
>674_residues MRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQD FTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGA TYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI PGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFA NGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYK KFDATLSGEIFDPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGIN MFKVLIAYLKPIIPSIVAETERFLNIQFISWADAPKFLINHKIDKFKPLATRIEKEKVDKILEDTKKMFENEQAPQSKKE EPKLDIAAECTFDDFMKVDLRIAKITEASHVEGADKLLKLILDLGGVTKQVFAGIKSAYKPEDLIGKHTIMVANLAPRKM KFGMSEGMVLAAGDGKGIYILEPHEGAQPGMRVK
Sequences:
>Translated_674_residues MRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQD FTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGA TYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI PGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFA NGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYK KFDATLSGEIFDPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGIN MFKVLIAYLKPIIPSIVAETERFLNIQFISWADAPKFLINHKIDKFKPLATRIEKEKVDKILEDTKKMFENEQAPQSKKE EPKLDIAAECTFDDFMKVDLRIAKITEASHVEGADKLLKLILDLGGVTKQVFAGIKSAYKPEDLIGKHTIMVANLAPRKM KFGMSEGMVLAAGDGKGIYILEPHEGAQPGMRVK >Mature_674_residues MRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAKSLGITPEELVTKYSNRHLQD FTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKAIAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGA TYDPTELINPRSVISGQSPIQKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI PGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHALFWPAILSSTGYKTPTSVFA NGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASRLTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYK KFDATLSGEIFDPELESEFSKNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGIN MFKVLIAYLKPIIPSIVAETERFLNIQFISWADAPKFLINHKIDKFKPLATRIEKEKVDKILEDTKKMFENEQAPQSKKE EPKLDIAAECTFDDFMKVDLRIAKITEASHVEGADKLLKLILDLGGVTKQVFAGIKSAYKPEDLIGKHTIMVANLAPRKM KFGMSEGMVLAAGDGKGIYILEPHEGAQPGMRVK
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI14043022, Length=575, Percent_Identity=27.8260869565217, Blast_Score=252, Evalue=9e-67, Organism=Homo sapiens, GI24308436, Length=517, Percent_Identity=24.5647969052224, Blast_Score=156, Evalue=7e-38, Organism=Escherichia coli, GI1788432, Length=679, Percent_Identity=55.3755522827688, Blast_Score=807, Evalue=0.0, Organism=Escherichia coli, GI1789455, Length=104, Percent_Identity=34.6153846153846, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17540794, Length=512, Percent_Identity=30.078125, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI212645096, Length=515, Percent_Identity=23.8834951456311, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI71992781, Length=343, Percent_Identity=24.198250728863, Blast_Score=87, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321704, Length=564, Percent_Identity=30.8510638297872, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6321610, Length=536, Percent_Identity=23.3208955223881, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI24655311, Length=559, Percent_Identity=28.4436493738819, Blast_Score=250, Evalue=3e-66, Organism=Drosophila melanogaster, GI21358483, Length=581, Percent_Identity=23.2358003442341, Blast_Score=131, Evalue=1e-30,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 76591; Mature: 76591
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS50886 TRBD ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAK CCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEC SLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKA CCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI HHHHCCCCCCEECCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCHHHHCCCCCC QKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI CCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC PGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHA CCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASR HHHHHHHHCCCCCCCHHHHHCCEEEECCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHH LTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATLSGEIFDPELESEFS HHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH KNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHH MFKVLIAYLKPIIPSIVAETERFLNIQFISWADAPKFLINHKIDKFKPLATRIEKEKVDK HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHH ILEDTKKMFENEQAPQSKKEEPKLDIAAECTFDDFMKVDLRIAKITEASHVEGADKLLKL HHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHEEEEEECCCHHCCCHHHHHHH ILDLGGVTKQVFAGIKSAYKPEDLIGKHTIMVANLAPRKMKFGMSEGMVLAAGDGKGIYI HHHHCCHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCHHHHCCCCCCEEEEECCCCEEEE LEPHEGAQPGMRVK ECCCCCCCCCCCCC >Mature Secondary Structure MRKILVTNALPYANGDLHLGHMLGYIQSDIWVRFQKLQGNQCIFVCGSDTHGTPIMLKAK CCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEC SLGITPEELVTKYSNRHLQDFTDFEINFDNYHSTHNSLNKEIVEDIYNKLNNKNLISKKA CCCCCHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH IAQAYDPEAKMFLPDRFVKGTCPKCKAEDQYGDSCEVCGATYDPTELINPRSVISGQSPI HHHHCCCCCCEECCCHHHCCCCCCCCCCCCCCCCHHCCCCCCCHHHHCCCHHHHCCCCCC QKNSEHFFFDLPALEKNIKDWIESNTLLQPEVANKLAEWFEQGLQSWDISRDAPYFGFAI CCCCCEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC PGTNEQKFFYVWLDAPMGYIASFKDYCNKNNINFGDFWGDSSSESELYHFIGKDIIYFHA CCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LFWPAILSSTGYKTPTSVFANGFLTVNGKKMSKSRGTFIQARTYLDNLEPSYLRYYFASR HHHHHHHHCCCCCCCHHHHHCCEEEECCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHH LTSRIDDIDLNLEEFVTKSNSDIVGKVVNIASRCAGFIYKKFDATLSGEIFDPELESEFS HHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH KNHDAITQAFEKREFAHAVRLIMALADKANQFIDYHKPWQLAKEEGQEQKVHQVCSQGIN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHH MFKVLIAYLKPIIPSIVAETERFLNIQFISWADAPKFLINHKIDKFKPLATRIEKEKVDK HHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHH ILEDTKKMFENEQAPQSKKEEPKLDIAAECTFDDFMKVDLRIAKITEASHVEGADKLLKL HHHHHHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHHHHEEEEEECCCHHCCCHHHHHHH ILDLGGVTKQVFAGIKSAYKPEDLIGKHTIMVANLAPRKMKFGMSEGMVLAAGDGKGIYI HHHHCCHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCHHHHCCCCCCEEEEECCCCEEEE LEPHEGAQPGMRVK ECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA