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The map label for this gene is yraN [C]

Identifier: 89255829

GI number: 89255829

Start: 385938

End: 386186

Strand: Reverse

Name: yraN [C]

Synonym: FTL_0418

Alternate gene names: 89255829

Gene position: 386186-385938 (Counterclockwise)

Preceding gene: 89255830

Following gene: 89255826

Centisome position: 20.37

GC content: 32.53

Gene sequence:

>249_bases
ATGCAAACAATAGAAATAGGTAACAAAGCAGAACTACAAGCGTGTAAGTTTTTACATACTCAAGCATTAGAAATTCTAGC
TCATAACTTCAAAGCTTTACCATATGGTGAAATAGATATCATTGCTTTGGATAAAGATACTCTAGTCTTTATTGAAGTAA
AATATCGCAGTAAGACCAAATTTGCTCAAGCTGAGGAAATGCTGACCTATAGCAAGCAACAAAAACTTGTAAACAGTGAG
TATAGTTAA

Upstream 100 bases:

>100_bases
GACATAGTGGCATTAACTAAAGATTTACATTTAAGAAACTACCCTTCAAATTATTGAAACGGTGGCAACCAAAAACTGAC
AGGACAGCACAATAAAGAAA

Downstream 100 bases:

>100_bases
TCCGAAAGATATTTGTAGAAAAAGATATTTGTAGAAATGTTATAATGTCTAATAAAAATGCCATCATATAGCCAAGATTT
TAGAGACATCGTAATTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MQTIEIGNKAELQACKFLHTQALEILAHNFKALPYGEIDIIALDKDTLVFIEVKYRSKTKFAQAEEMLTYSKQQKLVNSE
YS

Sequences:

>Translated_82_residues
MQTIEIGNKAELQACKFLHTQALEILAHNFKALPYGEIDIIALDKDTLVFIEVKYRSKTKFAQAEEMLTYSKQQKLVNSE
YS
>Mature_82_residues
MQTIEIGNKAELQACKFLHTQALEILAHNFKALPYGEIDIIALDKDTLVFIEVKYRSKTKFAQAEEMLTYSKQQKLVNSE
YS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 9440; Mature: 9440

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIEIGNKAELQACKFLHTQALEILAHNFKALPYGEIDIIALDKDTLVFIEVKYRSKTK
CCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
FAQAEEMLTYSKQQKLVNSEYS
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQTIEIGNKAELQACKFLHTQALEILAHNFKALPYGEIDIIALDKDTLVFIEVKYRSKTK
CCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
FAQAEEMLTYSKQQKLVNSEYS
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA