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The map label for this gene is yciF [H]

Identifier: 89054699

GI number: 89054699

Start: 2216399

End: 2216896

Strand: Reverse

Name: yciF [H]

Synonym: Jann_2208

Alternate gene names: 89054699

Gene position: 2216896-2216399 (Counterclockwise)

Preceding gene: 89054709

Following gene: 89054697

Centisome position: 51.34

GC content: 56.43

Gene sequence:

>498_bases
ATGAGTATCGACACATTGGAAGATCTCTATCTCGAACAACTTCGCGACATCTACAGCGCCAACATGCAAGCCCTTGATGT
GACCGACGCAATGGCACGCGCAGCCACAGATCCACAGCTTTCCGAGGCACTTCAGGCAGGGTCAAGGGGGATCAAGGGCG
GGATCGACGCGCTGGACCGGATTGGCAAACGCCACGATGAGGATGTCGGTGATGGCCATTGCAAAGGGATGGAAGGTTTG
GCGAAAGAAGCCCGCGCCCATGCAATCGAACAATCTTTTGGGGACGACGCTGCCAAAGACGCGATGATCATCACGCAATA
TCAGCGGCTCGTGCACTACGCGATTGCGGGATACGGGTGCCTTGCCGCTTTCGCGGAACGGTTGGAGCTGGATGACGACA
AGTTCGCGCTAAAGGACTGTCTTGACGCATCCTATGACGGGGATCGCACGATGACTGATCTGGCGACAGGTGGGATCAAC
GAGGATGCGATAGCCTGA

Upstream 100 bases:

>100_bases
GGTTTAGGAAAAGCCGACAAACAGGACTACGGGGGCAATGCGCGCTTCCTGAACCACCATTTCTGGCAGAGCGTAGACGC
TCATCTTGAAAGGAACGATG

Downstream 100 bases:

>100_bases
AGGGCAAGACGGTGCGTCGTGCTACGGTGCGCTGTCATGTATCTCCGGGTAGGCCGGGGGAAACCAGGATGTGTCCATAT
CGACGAATGGGTTCACATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSIDTLEDLYLEQLRDIYSANMQALDVTDAMARAATDPQLSEALQAGSRGIKGGIDALDRIGKRHDEDVGDGHCKGMEGL
AKEARAHAIEQSFGDDAAKDAMIITQYQRLVHYAIAGYGCLAAFAERLELDDDKFALKDCLDASYDGDRTMTDLATGGIN
EDAIA

Sequences:

>Translated_165_residues
MSIDTLEDLYLEQLRDIYSANMQALDVTDAMARAATDPQLSEALQAGSRGIKGGIDALDRIGKRHDEDVGDGHCKGMEGL
AKEARAHAIEQSFGDDAAKDAMIITQYQRLVHYAIAGYGCLAAFAERLELDDDKFALKDCLDASYDGDRTMTDLATGGIN
EDAIA
>Mature_164_residues
SIDTLEDLYLEQLRDIYSANMQALDVTDAMARAATDPQLSEALQAGSRGIKGGIDALDRIGKRHDEDVGDGHCKGMEGLA
KEARAHAIEQSFGDDAAKDAMIITQYQRLVHYAIAGYGCLAAFAERLELDDDKFALKDCLDASYDGDRTMTDLATGGINE
DAIA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=164, Percent_Identity=32.3170731707317, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 17834; Mature: 17703

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDTLEDLYLEQLRDIYSANMQALDVTDAMARAATDPQLSEALQAGSRGIKGGIDALDR
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHH
IGKRHDEDVGDGHCKGMEGLAKEARAHAIEQSFGDDAAKDAMIITQYQRLVHYAIAGYGC
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFAERLELDDDKFALKDCLDASYDGDRTMTDLATGGINEDAIA
HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SIDTLEDLYLEQLRDIYSANMQALDVTDAMARAATDPQLSEALQAGSRGIKGGIDALDR
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHH
IGKRHDEDVGDGHCKGMEGLAKEARAHAIEQSFGDDAAKDAMIITQYQRLVHYAIAGYGC
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAAFAERLELDDDKFALKDCLDASYDGDRTMTDLATGGINEDAIA
HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]