Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054697

Identifier: 89054697

GI number: 89054697

Start: 2215020

End: 2215361

Strand: Reverse

Name: 89054697

Synonym: Jann_2206

Alternate gene names: NA

Gene position: 2215361-2215020 (Counterclockwise)

Preceding gene: 89054699

Following gene: 89054696

Centisome position: 51.31

GC content: 58.77

Gene sequence:

>342_bases
ATGCCAAGATCTGACATTGAGAAACGTGTCGACCTGTCAACAATGCTCGACAGCCGCTTTCGGGTGCCGGGCACATCCCT
TCGGTTTGGTTGGGACTCCGTCCTGGGCCTCGTCCCCGGCGTGGGTGATGTCGCCACCCTCGCACCGTCTGCCTACCTGA
TCTATCGCGGGCACATGCTTGGGGCGAGAAAGCGGATCATCGGTCGGATGGCCGTCAACACCGGGATCGACTTTGTCGTG
GGGGCCGTGCCGATACTTGGGGACGTGTTCGATCTGGCCTTCAAGGCAAACAATCGAAATGTTGCGCCACTTCGGGCTGA
ACTTGAACATCGCAAAAGCTGA

Upstream 100 bases:

>100_bases
GTAGGCTTAGCACGTCTGGCCAAACGTCCTTCCGACGATCCTTGGGTACATTCGTGGTCTGATCCACACGATCTACATCG
TTGTTCGGAGGTGAGGGCAA

Downstream 100 bases:

>100_bases
GGGCACCGGATGATCCTGAACATTGACGTAAACCTCGCCTATTCAATAGAGCAGCCGGTTGACCTGATCCTACAGATACA
GGCGCCGAGCTTTGCGGACC

Product: transmembrane prediction

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPRSDIEKRVDLSTMLDSRFRVPGTSLRFGWDSVLGLVPGVGDVATLAPSAYLIYRGHMLGARKRIIGRMAVNTGIDFVV
GAVPILGDVFDLAFKANNRNVAPLRAELEHRKS

Sequences:

>Translated_113_residues
MPRSDIEKRVDLSTMLDSRFRVPGTSLRFGWDSVLGLVPGVGDVATLAPSAYLIYRGHMLGARKRIIGRMAVNTGIDFVV
GAVPILGDVFDLAFKANNRNVAPLRAELEHRKS
>Mature_112_residues
PRSDIEKRVDLSTMLDSRFRVPGTSLRFGWDSVLGLVPGVGDVATLAPSAYLIYRGHMLGARKRIIGRMAVNTGIDFVVG
AVPILGDVFDLAFKANNRNVAPLRAELEHRKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12379; Mature: 12247

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSDIEKRVDLSTMLDSRFRVPGTSLRFGWDSVLGLVPGVGDVATLAPSAYLIYRGHML
CCCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHCCCCCCHHHHCCCEEEEEECCHH
GARKRIIGRMAVNTGIDFVVGAVPILGDVFDLAFKANNRNVAPLRAELEHRKS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PRSDIEKRVDLSTMLDSRFRVPGTSLRFGWDSVLGLVPGVGDVATLAPSAYLIYRGHML
CCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHCCCCCCHHHHCCCEEEEEECCHH
GARKRIIGRMAVNTGIDFVVGAVPILGDVFDLAFKANNRNVAPLRAELEHRKS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA