Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054663
Identifier: 89054663
GI number: 89054663
Start: 2177591
End: 2177827
Strand: Reverse
Name: 89054663
Synonym: Jann_2172
Alternate gene names: NA
Gene position: 2177827-2177591 (Counterclockwise)
Preceding gene: 89054664
Following gene: 89054662
Centisome position: 50.44
GC content: 61.18
Gene sequence:
>237_bases ATGCCGATGCAAGCCTCCGAAATCGAAATGCTGCTGCGCGACAGCTTCCCCGACGCGAAGATCGAGGTGTCAGGCAATGA CGGCGTGCATATGGCTGCCATGGTCGTGGATGAAAGCTTCCGCGGCAAGAACCGCGTCCAGCAACAACGCGCCGTCTATG CGGCGCTGAAGGGCAAGATGGATGGCCCCTCGGGTGAATTGCACGCGCTGGCCCTGACGACGAAAGCGCCGGAATGA
Upstream 100 bases:
>100_bases ACCTATACCAACGCCTTCTCCCAAACCTTCGCCTGATACGCTTGCGGCGGGGTCCCCCGCGCCCTACATTTTGACGGGAC AGCCAAGGAACCGACCAACC
Downstream 100 bases:
>100_bases TGCGCCGTCTTGGTACCGCGATATGGCTGGCCCTTCTCGGCCCCCTCGCCCCTCTCGTCCGCCCCGTGCGGACCCAAATT ATCCCCGTGCGCGCCCGCAC
Product: BolA-like protein
Products: NA
Alternate protein names: BolA-Like Protein; Conserved Domain Protein; BolA Protein; Stress-Induced Morphogen; Stress-Induced Morphogen BolA-Like Protein; Morphology/Transcription Regulator BolA Family Protein; BolA/YrbA Family Protein
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPMQASEIEMLLRDSFPDAKIEVSGNDGVHMAAMVVDESFRGKNRVQQQRAVYAALKGKMDGPSGELHALALTTKAPE
Sequences:
>Translated_78_residues MPMQASEIEMLLRDSFPDAKIEVSGNDGVHMAAMVVDESFRGKNRVQQQRAVYAALKGKMDGPSGELHALALTTKAPE >Mature_77_residues PMQASEIEMLLRDSFPDAKIEVSGNDGVHMAAMVVDESFRGKNRVQQQRAVYAALKGKMDGPSGELHALALTTKAPE
Specific function: Unknown
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8473; Mature: 8342
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMQASEIEMLLRDSFPDAKIEVSGNDGVHMAAMVVDESFRGKNRVQQQRAVYAALKGKM CCCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC DGPSGELHALALTTKAPE CCCCCCEEEEEEECCCCC >Mature Secondary Structure PMQASEIEMLLRDSFPDAKIEVSGNDGVHMAAMVVDESFRGKNRVQQQRAVYAALKGKM CCCHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCC DGPSGELHALALTTKAPE CCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA