Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054532

Identifier: 89054532

GI number: 89054532

Start: 2046189

End: 2046695

Strand: Reverse

Name: 89054532

Synonym: Jann_2041

Alternate gene names: NA

Gene position: 2046695-2046189 (Counterclockwise)

Preceding gene: 89054533

Following gene: 89054523

Centisome position: 47.4

GC content: 60.55

Gene sequence:

>507_bases
ATGACGCAACGAGATACGGCGCAGGCGACATTCGCCCAGGACCTGTCCAATGTAACATCGGAGGCCGAGGCGCTTGAGGC
CCTCTACCAGCTGAGCCATACGCTGATGCCCGTGCGCCTGTGGACCGTCATGACCGTCGACCTGGACGCAGGCATCGCGC
GGCGCGCCTATTCCAACATGCCAAAGGCTTATCCCACATCCGGCACGAAACCGATCGTTCACAACGACTGGTTCGATATC
GTCCACGCGCAAAAGGAATGTTTTGTGGCGAACACTCTGGCCGACATCGCGGCGGTGTTCCCGGATCACGCGTTGATCGG
ATCGCTTGGCTGTGCATCGGTGATGAACTTGCCGATTTTCGAGGAGGGCACATTGCTGGCAACCGTGAACCTTCTGGACG
CGGAGGGTCATTTCACGGCTGACCGCGTCGCCACCTATTGCGACACCCTCGCAAGTCCTGCCTCACGGGCCATGCGCACG
GCCCGGGACTTGGCTCATGTCACGTGA

Upstream 100 bases:

>100_bases
TCGCGCCGTCCACCGCGCTCCATGACGGCAGCTTCGAAGATCCGTATTCCCAGACGCTCTACGCCGCCAGCGGCGGTCCC
GGTTGAGACAGGAGACATCC

Downstream 100 bases:

>100_bases
TGGCCAGCATCTCATCCGATGTCTGTTGTTCGGCTGCCATCTTTGATACTCCGGGCCCTATTGAGGGCCGGATGAATTGC
CCGGATGCGATGGATCAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTQRDTAQATFAQDLSNVTSEAEALEALYQLSHTLMPVRLWTVMTVDLDAGIARRAYSNMPKAYPTSGTKPIVHNDWFDI
VHAQKECFVANTLADIAAVFPDHALIGSLGCASVMNLPIFEEGTLLATVNLLDAEGHFTADRVATYCDTLASPASRAMRT
ARDLAHVT

Sequences:

>Translated_168_residues
MTQRDTAQATFAQDLSNVTSEAEALEALYQLSHTLMPVRLWTVMTVDLDAGIARRAYSNMPKAYPTSGTKPIVHNDWFDI
VHAQKECFVANTLADIAAVFPDHALIGSLGCASVMNLPIFEEGTLLATVNLLDAEGHFTADRVATYCDTLASPASRAMRT
ARDLAHVT
>Mature_167_residues
TQRDTAQATFAQDLSNVTSEAEALEALYQLSHTLMPVRLWTVMTVDLDAGIARRAYSNMPKAYPTSGTKPIVHNDWFDIV
HAQKECFVANTLADIAAVFPDHALIGSLGCASVMNLPIFEEGTLLATVNLLDAEGHFTADRVATYCDTLASPASRAMRTA
RDLAHVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18255; Mature: 18124

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRDTAQATFAQDLSNVTSEAEALEALYQLSHTLMPVRLWTVMTVDLDAGIARRAYSNM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCC
PKAYPTSGTKPIVHNDWFDIVHAQKECFVANTLADIAAVFPDHALIGSLGCASVMNLPIF
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
EEGTLLATVNLLDAEGHFTADRVATYCDTLASPASRAMRTARDLAHVT
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQRDTAQATFAQDLSNVTSEAEALEALYQLSHTLMPVRLWTVMTVDLDAGIARRAYSNM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCC
PKAYPTSGTKPIVHNDWFDIVHAQKECFVANTLADIAAVFPDHALIGSLGCASVMNLPIF
CCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
EEGTLLATVNLLDAEGHFTADRVATYCDTLASPASRAMRTARDLAHVT
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA