Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054531

Identifier: 89054531

GI number: 89054531

Start: 2045522

End: 2046022

Strand: Direct

Name: 89054531

Synonym: Jann_2040

Alternate gene names: NA

Gene position: 2045522-2046022 (Clockwise)

Preceding gene: 89054530

Following gene: 89054537

Centisome position: 47.37

GC content: 61.48

Gene sequence:

>501_bases
ATGGCGCTTACCCCAGATCAGATGCCTGACCGCGCCGAAGTGGTCTTCACCTGCAATGGCAAGGCGGTGGGCAAGATGCG
GAACGAGTTGGACGTGGCCATGGTAAAACCGTTCGAGGAGCGGTTTGCGCTGGCCACGGACGAGGGCGCGTTCCATGGCG
GGGATGCGTCCGCGCCGCCCCCGTTGGCGCTGTTCATCGCGGGATTGACCGGCTGCGTCATGACGCAGATCCGGGCCTTT
GCGAAACGCCTGAAGGTCACAGTGACCGACTTGGATGTGGAATGCCGGGTCGTGTGGGACTGGGCCAAAGCAGGGCCAGT
CTACGAGACCGGACCAAAGAGCTTTGAGATCGACATCATCCTGCACAGCCCCGACCCGATCGAAGCGCAACAGGCGCTGA
TCGAAGCGGCGAAGAAGGGGTGTTTTCTGGAGCAGACGCTGGGTCAGGCCAATACGATCCGTCACCGTCTGAAAGTCGGC
GATACGTTCATTGACGCGTGA

Upstream 100 bases:

>100_bases
GGGCTGGAGATCGGCAAGCGGCTCAGCGACGGCGATATGATGGATTTGACGATTGAGAAGATCGGAACCCTGACCAACAC
AATCAAGAAAGGGGCCTGAC

Downstream 100 bases:

>100_bases
TCGTTCGCGGTGGGTTTGGGGTGCGTTGACGATGGCGTGCACTCGGACATCAGACGACCAAGTGGGGTCTGATCCATCGC
ATCCGGGCAATTCATCCGGC

Product: OsmC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPPPLALFIAGLTGCVMTQIRAF
AKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDIILHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKVG
DTFIDA

Sequences:

>Translated_166_residues
MALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPPPLALFIAGLTGCVMTQIRAF
AKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDIILHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKVG
DTFIDA
>Mature_165_residues
ALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPPPLALFIAGLTGCVMTQIRAFA
KRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDIILHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKVGD
TFIDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18102; Mature: 17971

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPP
CCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCEEECCHHHHHEEECCCCCCCCCCCCCCC
PLALFIAGLTGCVMTQIRAFAKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDII
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEE
LHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKVGDTFIDA
EECCCCCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ALTPDQMPDRAEVVFTCNGKAVGKMRNELDVAMVKPFEERFALATDEGAFHGGDASAPP
CCCCCCCCCCEEEEEEECCCCHHHHHHHCCCEEECCHHHHHEEECCCCCCCCCCCCCCC
PLALFIAGLTGCVMTQIRAFAKRLKVTVTDLDVECRVVWDWAKAGPVYETGPKSFEIDII
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEE
LHSPDPIEAQQALIEAAKKGCFLEQTLGQANTIRHRLKVGDTFIDA
EECCCCCHHHHHHHHHHHCCCCHHHHHCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA