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The map label for this gene is ycgF [C]

Identifier: 89054521

GI number: 89054521

Start: 2035954

End: 2036406

Strand: Reverse

Name: ycgF [C]

Synonym: Jann_2030

Alternate gene names: 89054521

Gene position: 2036406-2035954 (Counterclockwise)

Preceding gene: 89054522

Following gene: 89054514

Centisome position: 47.16

GC content: 52.32

Gene sequence:

>453_bases
ATGACAGACGGGGACCTTCTTCGCGTTGTGTATTTTAGCTTTCAGAATACCGACATCGATCATGACGAGATAGATCAGCA
TGTGAACGAGATCCTGAAAAAATCTCAGTTCAACAATAGCCGCGCCAATGTGACCGGTGCCCTCATTTTCAACGCAGGTG
TGTTTGGTCAGATCCTGGAAGGCCCGATCACGGAGGTGGAAGACACCTTTGAGCGCATCCAGATGGATGAGAGGCACCGC
AACGTCACCGTGCTAGACAGCGCCCGCACGGAGGAACGCTTCTTTCCAAGGTGGTCTATGGGTTTTGTGGGGGCTGACCG
CTTCTGTAGCGAGCTGTTTGGTGGGATCGGAACAGAAACTGAATTTGATATCTCGTGCTTGAGTGGCCAGCAAATGTTCG
AGACACTTCACGCGCTGACCCTTCAGAAAGAGATCTCACACCGGGCCGCTTGA

Upstream 100 bases:

>100_bases
GTCGTCCGATCCCGCTCGACGACATTACATCTTTTCTCACGTCTTTACCGAACGAGATTGGCGGGAGAAAACCTTTGCCC
GCAATACAAGGAGACACGAC

Downstream 100 bases:

>100_bases
GTCATGTCGCGGTGGACCCACGCGTCGATCACAGATTTTACGGATTGGGTCGCTCGGGGACGTGGACGTCTGACGATTCC
GGCCCGCTTTCAACGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: BLUF Domain Protein; Photopigment And Puc Activator; Sensors Of Blue-Light Using FAD; Sensors Of Blue-Light Using FAD Family; Bluf Domain Protein

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTDGDLLRVVYFSFQNTDIDHDEIDQHVNEILKKSQFNNSRANVTGALIFNAGVFGQILEGPITEVEDTFERIQMDERHR
NVTVLDSARTEERFFPRWSMGFVGADRFCSELFGGIGTETEFDISCLSGQQMFETLHALTLQKEISHRAA

Sequences:

>Translated_150_residues
MTDGDLLRVVYFSFQNTDIDHDEIDQHVNEILKKSQFNNSRANVTGALIFNAGVFGQILEGPITEVEDTFERIQMDERHR
NVTVLDSARTEERFFPRWSMGFVGADRFCSELFGGIGTETEFDISCLSGQQMFETLHALTLQKEISHRAA
>Mature_149_residues
TDGDLLRVVYFSFQNTDIDHDEIDQHVNEILKKSQFNNSRANVTGALIFNAGVFGQILEGPITEVEDTFERIQMDERHRN
VTVLDSARTEERFFPRWSMGFVGADRFCSELFGGIGTETEFDISCLSGQQMFETLHALTLQKEISHRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17096; Mature: 16965

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDGDLLRVVYFSFQNTDIDHDEIDQHVNEILKKSQFNNSRANVTGALIFNAGVFGQILE
CCCCCEEEHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHC
GPITEVEDTFERIQMDERHRNVTVLDSARTEERFFPRWSMGFVGADRFCSELFGGIGTET
CCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
EFDISCLSGQQMFETLHALTLQKEISHRAA
CCCHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDGDLLRVVYFSFQNTDIDHDEIDQHVNEILKKSQFNNSRANVTGALIFNAGVFGQILE
CCCCEEEHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHC
GPITEVEDTFERIQMDERHRNVTVLDSARTEERFFPRWSMGFVGADRFCSELFGGIGTET
CCHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCC
EFDISCLSGQQMFETLHALTLQKEISHRAA
CCCHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA