Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054514
Identifier: 89054514
GI number: 89054514
Start: 2026530
End: 2028680
Strand: Reverse
Name: 89054514
Synonym: Jann_2023
Alternate gene names: NA
Gene position: 2028680-2026530 (Counterclockwise)
Preceding gene: 89054521
Following gene: 89054511
Centisome position: 46.98
GC content: 60.34
Gene sequence:
>2151_bases ATGAATTCAGCGCTCATAATCGCCCGGCGCACACTTGGTGCGATCGTCTTGGCGACCGCCGCGGGCGCAGCCCATGCGCA ATCTGACTCTGCGGGCGAGCCCGCCTGGGTGTATGGCGGGGCACCTGAGGGCGTACGCTTGGCTTGGCTGGATGAAACTG CCACGGAAGTCCTTTCAATCGGATGCGCCTCCGAGCAAGGGGGCTCGCGCGTAAATGCGGATATGACCCTAGGACCGGCC ATCGCGCCGTCCGCCAATCCGATCCTCTTTCAAACTTCGGAACAAAGCCTGGTTTTCCGTCCTCCGCAGTTCTTCAACGG AGAACGCGGCCCGCTTCGGATACAATTCCCACGCCGGTTCATGGCGAACCTCAGACAAGTCGGGGAGGACGCGCAGCTCA CCCTTGCGACCGATCAGGCTCAGGACCTGCAGATTGACCTCGCCCCAGCTATCCCGTTGATCGAACGGCTGGTTGGGCAT TGCCAGCGCGGGGCGGGTGACGGGTTGCCGTCTTTTGTCTGCACCAATGCGGCCACCGCAACGGATGGGGCGGTCTGTCG GGATCCGGAGGCATCAACTCTGGATCGCACCGTAGCCGACACTTATTTTGCGGCCTCGAGTGCGCTGTCAGGCAATGAAA GAATCCTTGCGCACGGACAAAACGAGAACTGGCACGCTGGCCGCCTGACTTGTGAACAGGACCTCGCATGTATTGCAGCG CAGGCTGAGGCATTTCTCGCCTCCCTTGAGGCTATTGCGCCTTCTTCCGCTCCGACGTCCATGCCCGAAAACCCCGCCTT TGCCGCCTGGCGCACCAACCCCGATCTGGCGCGCGCAGAGGCCGCCACGCACGGGGTCGACAACGCCATCTTGCTCGATA TCCGAGGCAATACCGCCTTCCTCGCAAGTAGATCTGTCACGTCGGGCACATGGATAGCCATACACGCCGTAGATGCGCAG ACAGTTGTCCCGGAAGGCCCGGACCGATCAACGATTATCGCGGAACTGACGCGCAACGCAGGACTTCAGTTTCCTGAAAT ATCACTGTTTCACGTGCGTCTGGGGCATCCGCTTCCGGATGGTTTGGGAGGACGCGGCACGTTCGGCACAGCCGTAGTTC AGGAGAATTTTCGACCCTCCATCGCCGGAAACCACTCTGCGAATAGACGACTAAGCTGGAGTCCCGGCTACGCCGATGCG CCGCGCAGTTGGGCGGATGCTGAAGCTGAACTATTGGGGCGCGAAGCGGCCAATGAAGCTGCACGACAAGAGGCTTTGGC TGCAGCAGCCATTGCAAGACAGGCTGCACAAGATGCTGCACGCGCCAGCGCGAGCGAAATCATCGATAGTGGTCAGGTCT ACCTTTCGCCGGGTTTCTGGACTGATTTCTACGATCCATCAGTTATTCGTTCGATTTTCCACGGGACTGCGACTTACTCG CCGGAGGCCCCGGCTCTCATCCGCTCTACGGCGGGCTATGTGATGGCGTACAGCGCGCGCTGCAGTTCATATCTTCCCGC CGATGCTGTTGTTTTCACGGACGTCGAGACCACCCGGATCTTGAACGGGTTTGGGGTGCAACTGCATGCTTCGGAAAATA TCCGCCAGTTGTCTGTTCACCCGCGTCTGGCCGGTGTGATGGCACAGCACCGCAGGTCAGAGTCTGGCGGGGGAGGCCTA CAGCAGGGCTTGGTTCTTGCGGACGGGGTGTTCTCGGGTCGCATATCGTTGGGTGATGCGATCAATCAGGTTGCGGGCTT TGCCATAGATGCACAGCGACTAGTGACAAGCTTCCCATGTGACAGCGCGCCGGTCCGGCAGTTGTTCGAAAATCTGGTCG CGCTGACAGGCGACACACCCACTTTGGCACGAACAGGTATCGGCGTTGAGGGCGCGGCTGCATACAGCGATCCGGTTCCC GGAGCCGCGCCGTTCATCAGGGTCTCCGATGCGTGCATGTACTGGGCGATCGACGCAACGCTCTCCGCGCCGTTCTGCCG ATGCCTGGAAAACCGGCTTGTCGCCCCTGAACGGGAGGTGGCTTTGTCCGATTTCGCATCCTTTATGCGAGACTTTGGGC TTGAAGGTTCGCAAGCGGATACGCCCGGCGCGCGCAGACAACTGGCTTGTATCCGAGAAACAGCTCGGTAA
Upstream 100 bases:
>100_bases CGTGGCTCAGGCATCGCGGCACACATTGATCTTGACCCAGACTATGGATCGGGAAAATCGTGTTTTTAGGTGAAAATTCT TTTGATACGGAGAGCAGGAC
Downstream 100 bases:
>100_bases CCGTTTGATCTGGAAACAACCACTTCAGCATAAGCCATATGTCCGGAAAAGGCGGCACACGTCATGGGTCACTGATGTAC CAAGCAAAGCCGCTGCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MNSALIIARRTLGAIVLATAAGAAHAQSDSAGEPAWVYGGAPEGVRLAWLDETATEVLSIGCASEQGGSRVNADMTLGPA IAPSANPILFQTSEQSLVFRPPQFFNGERGPLRIQFPRRFMANLRQVGEDAQLTLATDQAQDLQIDLAPAIPLIERLVGH CQRGAGDGLPSFVCTNAATATDGAVCRDPEASTLDRTVADTYFAASSALSGNERILAHGQNENWHAGRLTCEQDLACIAA QAEAFLASLEAIAPSSAPTSMPENPAFAAWRTNPDLARAEAATHGVDNAILLDIRGNTAFLASRSVTSGTWIAIHAVDAQ TVVPEGPDRSTIIAELTRNAGLQFPEISLFHVRLGHPLPDGLGGRGTFGTAVVQENFRPSIAGNHSANRRLSWSPGYADA PRSWADAEAELLGREAANEAARQEALAAAAIARQAAQDAARASASEIIDSGQVYLSPGFWTDFYDPSVIRSIFHGTATYS PEAPALIRSTAGYVMAYSARCSSYLPADAVVFTDVETTRILNGFGVQLHASENIRQLSVHPRLAGVMAQHRRSESGGGGL QQGLVLADGVFSGRISLGDAINQVAGFAIDAQRLVTSFPCDSAPVRQLFENLVALTGDTPTLARTGIGVEGAAAYSDPVP GAAPFIRVSDACMYWAIDATLSAPFCRCLENRLVAPEREVALSDFASFMRDFGLEGSQADTPGARRQLACIRETAR
Sequences:
>Translated_716_residues MNSALIIARRTLGAIVLATAAGAAHAQSDSAGEPAWVYGGAPEGVRLAWLDETATEVLSIGCASEQGGSRVNADMTLGPA IAPSANPILFQTSEQSLVFRPPQFFNGERGPLRIQFPRRFMANLRQVGEDAQLTLATDQAQDLQIDLAPAIPLIERLVGH CQRGAGDGLPSFVCTNAATATDGAVCRDPEASTLDRTVADTYFAASSALSGNERILAHGQNENWHAGRLTCEQDLACIAA QAEAFLASLEAIAPSSAPTSMPENPAFAAWRTNPDLARAEAATHGVDNAILLDIRGNTAFLASRSVTSGTWIAIHAVDAQ TVVPEGPDRSTIIAELTRNAGLQFPEISLFHVRLGHPLPDGLGGRGTFGTAVVQENFRPSIAGNHSANRRLSWSPGYADA PRSWADAEAELLGREAANEAARQEALAAAAIARQAAQDAARASASEIIDSGQVYLSPGFWTDFYDPSVIRSIFHGTATYS PEAPALIRSTAGYVMAYSARCSSYLPADAVVFTDVETTRILNGFGVQLHASENIRQLSVHPRLAGVMAQHRRSESGGGGL QQGLVLADGVFSGRISLGDAINQVAGFAIDAQRLVTSFPCDSAPVRQLFENLVALTGDTPTLARTGIGVEGAAAYSDPVP GAAPFIRVSDACMYWAIDATLSAPFCRCLENRLVAPEREVALSDFASFMRDFGLEGSQADTPGARRQLACIRETAR >Mature_716_residues MNSALIIARRTLGAIVLATAAGAAHAQSDSAGEPAWVYGGAPEGVRLAWLDETATEVLSIGCASEQGGSRVNADMTLGPA IAPSANPILFQTSEQSLVFRPPQFFNGERGPLRIQFPRRFMANLRQVGEDAQLTLATDQAQDLQIDLAPAIPLIERLVGH CQRGAGDGLPSFVCTNAATATDGAVCRDPEASTLDRTVADTYFAASSALSGNERILAHGQNENWHAGRLTCEQDLACIAA QAEAFLASLEAIAPSSAPTSMPENPAFAAWRTNPDLARAEAATHGVDNAILLDIRGNTAFLASRSVTSGTWIAIHAVDAQ TVVPEGPDRSTIIAELTRNAGLQFPEISLFHVRLGHPLPDGLGGRGTFGTAVVQENFRPSIAGNHSANRRLSWSPGYADA PRSWADAEAELLGREAANEAARQEALAAAAIARQAAQDAARASASEIIDSGQVYLSPGFWTDFYDPSVIRSIFHGTATYS PEAPALIRSTAGYVMAYSARCSSYLPADAVVFTDVETTRILNGFGVQLHASENIRQLSVHPRLAGVMAQHRRSESGGGGL QQGLVLADGVFSGRISLGDAINQVAGFAIDAQRLVTSFPCDSAPVRQLFENLVALTGDTPTLARTGIGVEGAAAYSDPVP GAAPFIRVSDACMYWAIDATLSAPFCRCLENRLVAPEREVALSDFASFMRDFGLEGSQADTPGARRQLACIRETAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75590; Mature: 75590
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSALIIARRTLGAIVLATAAGAAHAQSDSAGEPAWVYGGAPEGVRLAWLDETATEVLSI CCCEEEEEEHHHCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHH GCASEQGGSRVNADMTLGPAIAPSANPILFQTSEQSLVFRPPQFFNGERGPLRIQFPRRF CCCCCCCCCEECCCEEECCCCCCCCCEEEEEECCCCEEECCCHHCCCCCCCEEEECCHHH MANLRQVGEDAQLTLATDQAQDLQIDLAPAIPLIERLVGHCQRGAGDGLPSFVCTNAATA HHHHHHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC TDGAVCRDPEASTLDRTVADTYFAASSALSGNERILAHGQNENWHAGRLTCEQDLACIAA CCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH QAEAFLASLEAIAPSSAPTSMPENPAFAAWRTNPDLARAEAATHGVDNAILLDIRGNTAF HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEECCCEEE LASRSVTSGTWIAIHAVDAQTVVPEGPDRSTIIAELTRNAGLQFPEISLFHVRLGHPLPD EEECCCCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCC GLGGRGTFGTAVVQENFRPSIAGNHSANRRLSWSPGYADAPRSWADAEAELLGREAANEA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH ARQEALAAAAIARQAAQDAARASASEIIDSGQVYLSPGFWTDFYDPSVIRSIFHGTATYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCC PEAPALIRSTAGYVMAYSARCSSYLPADAVVFTDVETTRILNGFGVQLHASENIRQLSVH CCCCHHHHHCCCEEEEEECHHCCCCCCCEEEEECCHHHHHHCCCCEEEECCCCCEEEECC PRLAGVMAQHRRSESGGGGLQQGLVLADGVFSGRISLGDAINQVAGFAIDAQRLVTSFPC HHHHHHHHHHHCCCCCCCCHHCCEEEECCEEECCEEHHHHHHHHHCCEEEHHHHHHHCCC DSAPVRQLFENLVALTGDTPTLARTGIGVEGAAAYSDPVPGAAPFIRVSDACMYWAIDAT CCHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECH LSAPFCRCLENRLVAPEREVALSDFASFMRDFGLEGSQADTPGARRQLACIRETAR HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNSALIIARRTLGAIVLATAAGAAHAQSDSAGEPAWVYGGAPEGVRLAWLDETATEVLSI CCCEEEEEEHHHCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHH GCASEQGGSRVNADMTLGPAIAPSANPILFQTSEQSLVFRPPQFFNGERGPLRIQFPRRF CCCCCCCCCEECCCEEECCCCCCCCCEEEEEECCCCEEECCCHHCCCCCCCEEEECCHHH MANLRQVGEDAQLTLATDQAQDLQIDLAPAIPLIERLVGHCQRGAGDGLPSFVCTNAATA HHHHHHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC TDGAVCRDPEASTLDRTVADTYFAASSALSGNERILAHGQNENWHAGRLTCEQDLACIAA CCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHH QAEAFLASLEAIAPSSAPTSMPENPAFAAWRTNPDLARAEAATHGVDNAILLDIRGNTAF HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEECCCEEE LASRSVTSGTWIAIHAVDAQTVVPEGPDRSTIIAELTRNAGLQFPEISLFHVRLGHPLPD EEECCCCCCEEEEEEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEECCCCCC GLGGRGTFGTAVVQENFRPSIAGNHSANRRLSWSPGYADAPRSWADAEAELLGREAANEA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH ARQEALAAAAIARQAAQDAARASASEIIDSGQVYLSPGFWTDFYDPSVIRSIFHGTATYS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCC PEAPALIRSTAGYVMAYSARCSSYLPADAVVFTDVETTRILNGFGVQLHASENIRQLSVH CCCCHHHHHCCCEEEEEECHHCCCCCCCEEEEECCHHHHHHCCCCEEEECCCCCEEEECC PRLAGVMAQHRRSESGGGGLQQGLVLADGVFSGRISLGDAINQVAGFAIDAQRLVTSFPC HHHHHHHHHHHCCCCCCCCHHCCEEEECCEEECCEEHHHHHHHHHCCEEEHHHHHHHCCC DSAPVRQLFENLVALTGDTPTLARTGIGVEGAAAYSDPVPGAAPFIRVSDACMYWAIDAT CCHHHHHHHHHHHEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEEECH LSAPFCRCLENRLVAPEREVALSDFASFMRDFGLEGSQADTPGARRQLACIRETAR HCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA