Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054520
Identifier: 89054520
GI number: 89054520
Start: 2034587
End: 2035435
Strand: Direct
Name: 89054520
Synonym: Jann_2029
Alternate gene names: NA
Gene position: 2034587-2035435 (Clockwise)
Preceding gene: 89054519
Following gene: 89054524
Centisome position: 47.12
GC content: 54.18
Gene sequence:
>849_bases ATGATCGCAATCTTTGAGCCATGGCTGAAGGCGTCGCACAGATACACTTCGGCCTATCTGGCGAATTCCCAGTCTACCGG GGATGACCTCTCTGCATTCTTGAGTAAGTATGAAATTGACCGGTCGGTGGGCGTTATCTCACTCGCTCAAGCACCGCTGT TCCGTGATGACGAAGACGAGGCCGCAACACGCAAAGCCGATGGAGCGCCACAGTCGGTCGAACGTGTGTCCATGCCAACC CCACAACGCATTCGCGTGCTCCAGACGCACCCCTACGTTCTTTGCGTCGGCACGTTAGAAGCCCGTAAAAACATCTGGAA AATCGCACAAAGTTGGCAACGGCTTGCCAACATCGATGGTCTTTCGCTGCCCAGGCTTGTGTTTGCGGGTCAACCTGGAT GGATGATACGTGATTTCGAGCGCATGATGGACGCAACCGGATATCTTTCAGGATGGATTGAAACAGTCGAGAGGGCGAGC GATGCTGAGCTTGATGCCCTTTATAAAAACTGTCTCTTCACGATCAAAGCGAGCTATTACGAGGGTTGGGGTCTGCCAAT TGGTGAAAGCCTTGCCTATGGCAAGACCGCCGTTGTCTCGCAGACCAGCTCGATGCCGGAAGTCGGTGGTAATATGGTGG AATACTGCGATCCGAATTCGATCGATAGTATCGTGGCTGCCTGTCGAAAACTGATTGATGATCCGGGTCATCGCAAAACG CTCGAGGCACGGATTTCGGCGGCTTCGCTTCGTCAATGGGGGTCGGTCGCAGATGATCTTCTGGCCGCCCTTGATGCGCA TGTCGCAGAGACCCCAAGAAGTGACATGCAGACGCCCGTGTTGTCGTGA
Upstream 100 bases:
>100_bases CTCTCGCCGCTTTTCAGGCCGCAAAGGACAGCGGTATTGTCGTGCACACTATGCTGCATGACCTCATTCGGTCGTGGCTC CAGAGGTCGTCAAGGATGAC
Downstream 100 bases:
>100_bases GATCCAGTATGATGTAGGTGCGCGGGCCGATCACCACAAAAGCGCGATCTGGCTCCACCCTTTTCAGACTTGGTCTCATG GATGCAGTGTGACGCAACAG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase; Mannosyltransferase B; Glycosyltransferase WbpX; Glycosyl Transferase Group 1 Family; Glycosyl Transferase Group 1 Protein; Mannosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase II; Glycosyltransferase WbpY; Lipopolysaccharide N-Acetylglucosaminyltransferase I; Mannosyl Transferase B; Glycosyl Transferase Protein; Second Mannosyl Transferase; Glycosyl Transferase WbpY; Bifunctional Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferases Group 1 Protein
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIAIFEPWLKASHRYTSAYLANSQSTGDDLSAFLSKYEIDRSVGVISLAQAPLFRDDEDEAATRKADGAPQSVERVSMPT PQRIRVLQTHPYVLCVGTLEARKNIWKIAQSWQRLANIDGLSLPRLVFAGQPGWMIRDFERMMDATGYLSGWIETVERAS DAELDALYKNCLFTIKASYYEGWGLPIGESLAYGKTAVVSQTSSMPEVGGNMVEYCDPNSIDSIVAACRKLIDDPGHRKT LEARISAASLRQWGSVADDLLAALDAHVAETPRSDMQTPVLS
Sequences:
>Translated_282_residues MIAIFEPWLKASHRYTSAYLANSQSTGDDLSAFLSKYEIDRSVGVISLAQAPLFRDDEDEAATRKADGAPQSVERVSMPT PQRIRVLQTHPYVLCVGTLEARKNIWKIAQSWQRLANIDGLSLPRLVFAGQPGWMIRDFERMMDATGYLSGWIETVERAS DAELDALYKNCLFTIKASYYEGWGLPIGESLAYGKTAVVSQTSSMPEVGGNMVEYCDPNSIDSIVAACRKLIDDPGHRKT LEARISAASLRQWGSVADDLLAALDAHVAETPRSDMQTPVLS >Mature_282_residues MIAIFEPWLKASHRYTSAYLANSQSTGDDLSAFLSKYEIDRSVGVISLAQAPLFRDDEDEAATRKADGAPQSVERVSMPT PQRIRVLQTHPYVLCVGTLEARKNIWKIAQSWQRLANIDGLSLPRLVFAGQPGWMIRDFERMMDATGYLSGWIETVERAS DAELDALYKNCLFTIKASYYEGWGLPIGESLAYGKTAVVSQTSSMPEVGGNMVEYCDPNSIDSIVAACRKLIDDPGHRKT LEARISAASLRQWGSVADDLLAALDAHVAETPRSDMQTPVLS
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31124; Mature: 31124
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIFEPWLKASHRYTSAYLANSQSTGDDLSAFLSKYEIDRSVGVISLAQAPLFRDDEDE CCEEECHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHH AATRKADGAPQSVERVSMPTPQRIRVLQTHPYVLCVGTLEARKNIWKIAQSWQRLANIDG HHHHCCCCCCHHHHHCCCCCHHHEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCC LSLPRLVFAGQPGWMIRDFERMMDATGYLSGWIETVERASDAELDALYKNCLFTIKASYY CCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCC EGWGLPIGESLAYGKTAVVSQTSSMPEVGGNMVEYCDPNSIDSIVAACRKLIDDPGHRKT CCCCCCCCCCHHCCCHHHHHCCCCCHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHH LEARISAASLRQWGSVADDLLAALDAHVAETPRSDMQTPVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure MIAIFEPWLKASHRYTSAYLANSQSTGDDLSAFLSKYEIDRSVGVISLAQAPLFRDDEDE CCEEECHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHH AATRKADGAPQSVERVSMPTPQRIRVLQTHPYVLCVGTLEARKNIWKIAQSWQRLANIDG HHHHCCCCCCHHHHHCCCCCHHHEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHCCCC LSLPRLVFAGQPGWMIRDFERMMDATGYLSGWIETVERASDAELDALYKNCLFTIKASYY CCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCC EGWGLPIGESLAYGKTAVVSQTSSMPEVGGNMVEYCDPNSIDSIVAACRKLIDDPGHRKT CCCCCCCCCCHHCCCHHHHHCCCCCHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHH LEARISAASLRQWGSVADDLLAALDAHVAETPRSDMQTPVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA