Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054519

Identifier: 89054519

GI number: 89054519

Start: 2033979

End: 2034590

Strand: Direct

Name: 89054519

Synonym: Jann_2028

Alternate gene names: NA

Gene position: 2033979-2034590 (Clockwise)

Preceding gene: 89054518

Following gene: 89054520

Centisome position: 47.1

GC content: 55.39

Gene sequence:

>612_bases
ATGACGCAGTACTTCTTCGACATAAGCGGCGTCCTCAACTATCTGAGTTATGGTAGCCGCTTCACCGGCATTCAACGGGT
TGTCGTGACACTGGCTGATGCCGCGTGCCAAAAAATACCTGCGGGCCAGGCGTTCATTTCCTATCTCGACCCTAGTAGAG
GGCGTTATGTCGCTGTGCCCTACACCAGGTTGGCGGGCGGCCGCCTCACAGACCCGGATCGATTGCGGGCGTCGTTTGGT
ATGCGGCCGCCTCTGAGTGATCGACAAAAACCGTCTCTGAGAAAGTATGACGGCAAGTCTATGCGGGCGCTGTATCACGC
CGTTCGCTTCGATTTGTATGCAAAGCTTGGCCGTGGCAAATATCAACGGGACAAGCAGACGTCGTCCCGTTCACTATCCT
CGTCGGCGCTGTTTAATGGTGGCTGTCCGGACGTACGACCGTTTGAAGAACTGGCGACCGCAAGAGATCACCTGGTTTTG
ATGGATTCTGTCTGGGGCAATGAGAAAGCTCTCGCCGCTTTTCAGGCCGCAAAGGACAGCGGTATTGTCGTGCACACTAT
GCTGCATGACCTCATTCGGTCGTGGCTCCAGAGGTCGTCAAGGATGACATGA

Upstream 100 bases:

>100_bases
TATACCTAACTGAGGCTGCCCACCCCGATCACGGATGACGAACAACGCTAGTGCCCGCTTGGCTCCGGTTATGTCGACGG
CAATTGCCAAGGATTAGACA

Downstream 100 bases:

>100_bases
TCGCAATCTTTGAGCCATGGCTGAAGGCGTCGCACAGATACACTTCGGCCTATCTGGCGAATTCCCAGTCTACCGGGGAT
GACCTCTCTGCATTCTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTQYFFDISGVLNYLSYGSRFTGIQRVVVTLADAACQKIPAGQAFISYLDPSRGRYVAVPYTRLAGGRLTDPDRLRASFG
MRPPLSDRQKPSLRKYDGKSMRALYHAVRFDLYAKLGRGKYQRDKQTSSRSLSSSALFNGGCPDVRPFEELATARDHLVL
MDSVWGNEKALAAFQAAKDSGIVVHTMLHDLIRSWLQRSSRMT

Sequences:

>Translated_203_residues
MTQYFFDISGVLNYLSYGSRFTGIQRVVVTLADAACQKIPAGQAFISYLDPSRGRYVAVPYTRLAGGRLTDPDRLRASFG
MRPPLSDRQKPSLRKYDGKSMRALYHAVRFDLYAKLGRGKYQRDKQTSSRSLSSSALFNGGCPDVRPFEELATARDHLVL
MDSVWGNEKALAAFQAAKDSGIVVHTMLHDLIRSWLQRSSRMT
>Mature_202_residues
TQYFFDISGVLNYLSYGSRFTGIQRVVVTLADAACQKIPAGQAFISYLDPSRGRYVAVPYTRLAGGRLTDPDRLRASFGM
RPPLSDRQKPSLRKYDGKSMRALYHAVRFDLYAKLGRGKYQRDKQTSSRSLSSSALFNGGCPDVRPFEELATARDHLVLM
DSVWGNEKALAAFQAAKDSGIVVHTMLHDLIRSWLQRSSRMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22793; Mature: 22662

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQYFFDISGVLNYLSYGSRFTGIQRVVVTLADAACQKIPAGQAFISYLDPSRGRYVAVP
CCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEC
YTRLAGGRLTDPDRLRASFGMRPPLSDRQKPSLRKYDGKSMRALYHAVRFDLYAKLGRGK
HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCC
YQRDKQTSSRSLSSSALFNGGCPDVRPFEELATARDHLVLMDSVWGNEKALAAFQAAKDS
CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCC
GIVVHTMLHDLIRSWLQRSSRMT
CEEHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQYFFDISGVLNYLSYGSRFTGIQRVVVTLADAACQKIPAGQAFISYLDPSRGRYVAVP
CCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEC
YTRLAGGRLTDPDRLRASFGMRPPLSDRQKPSLRKYDGKSMRALYHAVRFDLYAKLGRGK
HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCC
YQRDKQTSSRSLSSSALFNGGCPDVRPFEELATARDHLVLMDSVWGNEKALAAFQAAKDS
CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCEEEEECCCCCHHHHHHHHHHCCC
GIVVHTMLHDLIRSWLQRSSRMT
CEEHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA