Click here to switch to the map view.

The map label for this gene is rhtA [H]

Identifier: 89054498

GI number: 89054498

Start: 2013892

End: 2014761

Strand: Reverse

Name: rhtA [H]

Synonym: Jann_2007

Alternate gene names: 89054498

Gene position: 2014761-2013892 (Counterclockwise)

Preceding gene: 89054501

Following gene: 89054496

Centisome position: 46.66

GC content: 58.51

Gene sequence:

>870_bases
ATGTCAGAGGCGGTCCCACCGCACGCGTGGTTCGGCGTCTCTGCCGTCTTCCACTATCTCGGTCCCGCCTTTGCCGTCCT
ACTATTCCCTGTTGTTGGCGTGCTGGGGGTGGCATGGTTTCGCATTGCTTCTGCCGCCTTAGTCTTCGCGCCGATCACAA
AGCCCTGGCGTACATTCAAGAATTCGACCAACCGCGAACGCGTCCTGCTTCTGGCACTCGGTGGCTGTCTGGCTGTCATG
AACAGCTCTTTCTATCTCGCATTGGACCGTTTGCCGATTGCACTGGTCGCGGCCATCGAATTCGTCGGGACCATTGGTAT
TGCGCTTTGGGGCTTACGGACAGGGCGCAATTACCTCGCCTTTGCCGTGGCGATCTTCGGTGTCGCACTGCTGATCGACG
TGCCGTCTCTTCTCGCTGCGGATGGCGAAGCCCTCACGTCCGATCTGTTAGGTCTCTTCTGGGCTGTCCTGAATGGTTCA
CTCTTCGTCCTCTATGTCATTCTCGGGCACAAGATTTCCGAAGGCGGTGCATCCGGCGGTGTAGAGCGACTTGGCGCGGC
GATGACAGCCGCGTTCATCTTCGTGATGCCAATCGGGTTCTTGCAGGCATTGGAAGCTTTCGGCGCACCCCTGCTGGTCT
TGGCTGGAATTGGTGTCGGTATCTGCTCATCTGTGATCCCCTATGTCTGCGACCAACTCGCCATGTCGCGCCTGCCCCGT
GCCAGTTTCGCATTCCTGCTGGCTCTACTGCCAGCCACGGCAACCATCATCGGCGTGATTGTGCTGCGCCAAATCCCGAG
CGCGATAGACGTTATCGGTGTAGTCTTGGTGATGGTCGGGGTAGCGGTCCACAAACCTGCCCCTATCTGA

Upstream 100 bases:

>100_bases
CTCCATATCATACCTGCAAAACACCTTGCATTATGACGTTATGTCGAATCAAGCCCCCACAAACCCCGCCTCCGCCAGCG
CCCCTGGTGCTATGTCCCGC

Downstream 100 bases:

>100_bases
ACAGCAAAAGCTGACGTTCGTGGATGCCGCAGCATCAGTGAATCTGGGCTCTCTCCGGACTTCGGAGGCAACGCCGCATC
GGCATACCTAGTAACCTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSEAVPPHAWFGVSAVFHYLGPAFAVLLFPVVGVLGVAWFRIASAALVFAPITKPWRTFKNSTNRERVLLLALGGCLAVM
NSSFYLALDRLPIALVAAIEFVGTIGIALWGLRTGRNYLAFAVAIFGVALLIDVPSLLAADGEALTSDLLGLFWAVLNGS
LFVLYVILGHKISEGGASGGVERLGAAMTAAFIFVMPIGFLQALEAFGAPLLVLAGIGVGICSSVIPYVCDQLAMSRLPR
ASFAFLLALLPATATIIGVIVLRQIPSAIDVIGVVLVMVGVAVHKPAPI

Sequences:

>Translated_289_residues
MSEAVPPHAWFGVSAVFHYLGPAFAVLLFPVVGVLGVAWFRIASAALVFAPITKPWRTFKNSTNRERVLLLALGGCLAVM
NSSFYLALDRLPIALVAAIEFVGTIGIALWGLRTGRNYLAFAVAIFGVALLIDVPSLLAADGEALTSDLLGLFWAVLNGS
LFVLYVILGHKISEGGASGGVERLGAAMTAAFIFVMPIGFLQALEAFGAPLLVLAGIGVGICSSVIPYVCDQLAMSRLPR
ASFAFLLALLPATATIIGVIVLRQIPSAIDVIGVVLVMVGVAVHKPAPI
>Mature_288_residues
SEAVPPHAWFGVSAVFHYLGPAFAVLLFPVVGVLGVAWFRIASAALVFAPITKPWRTFKNSTNRERVLLLALGGCLAVMN
SSFYLALDRLPIALVAAIEFVGTIGIALWGLRTGRNYLAFAVAIFGVALLIDVPSLLAADGEALTSDLLGLFWAVLNGSL
FVLYVILGHKISEGGASGGVERLGAAMTAAFIFVMPIGFLQALEAFGAPLLVLAGIGVGICSSVIPYVCDQLAMSRLPRA
SFAFLLALLPATATIIGVIVLRQIPSAIDVIGVVLVMVGVAVHKPAPI

Specific function: Unknown

COG id: COG5006

COG function: function code R; Predicted permease, DMT superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1787033, Length=253, Percent_Identity=31.2252964426877, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30224; Mature: 30092

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAVPPHAWFGVSAVFHYLGPAFAVLLFPVVGVLGVAWFRIASAALVFAPITKPWRTFK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
NSTNRERVLLLALGGCLAVMNSSFYLALDRLPIALVAAIEFVGTIGIALWGLRTGRNYLA
CCCCCCEEEEHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FAVAIFGVALLIDVPSLLAADGEALTSDLLGLFWAVLNGSLFVLYVILGHKISEGGASGG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
VERLGAAMTAAFIFVMPIGFLQALEAFGAPLLVLAGIGVGICSSVIPYVCDQLAMSRLPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ASFAFLLALLPATATIIGVIVLRQIPSAIDVIGVVLVMVGVAVHKPAPI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEAVPPHAWFGVSAVFHYLGPAFAVLLFPVVGVLGVAWFRIASAALVFAPITKPWRTFK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
NSTNRERVLLLALGGCLAVMNSSFYLALDRLPIALVAAIEFVGTIGIALWGLRTGRNYLA
CCCCCCEEEEHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
FAVAIFGVALLIDVPSLLAADGEALTSDLLGLFWAVLNGSLFVLYVILGHKISEGGASGG
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
VERLGAAMTAAFIFVMPIGFLQALEAFGAPLLVLAGIGVGICSSVIPYVCDQLAMSRLPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ASFAFLLALLPATATIIGVIVLRQIPSAIDVIGVVLVMVGVAVHKPAPI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]