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The map label for this gene is 89054457

Identifier: 89054457

GI number: 89054457

Start: 1959330

End: 1959926

Strand: Direct

Name: 89054457

Synonym: Jann_1966

Alternate gene names: NA

Gene position: 1959330-1959926 (Clockwise)

Preceding gene: 89054456

Following gene: 89054458

Centisome position: 45.38

GC content: 60.47

Gene sequence:

>597_bases
ATGCAAGCCAGTGACGAAATTGACTTCAAGACATCGTTTGTCCGTGCGCCGGGGGCGTTGAAGCACAACCCGGCCCTGGT
GCTGAATGCGGATTACCGTCCCTTGAGCTATCTGCCCCTGTCGCTCTGGCCCTGGCAGGAGGCGGTGAAGGCAGTGTATC
TGGACCGCGTTCAGATCGTGGCGGAATACGACGATTTCGTGCATTCGCCGTCGACGTCCATTCGCATCCCCTCGGTCGTG
GTGCTGCGCGATTATGTGAAGCCCCAGAAGCGGGTGGCGTTCACGCGGTTCAACCTGTTCCTGCGCGATCACTTCAGCTG
TCAATATTGCGGCGCGACAGGGGATCTGACCTTCGATCATGTGGTGCCGCGCGCCAGCGGTGGTGTGACATCCTGGGAGA
ATGTGGTGGCGGCGTGTTCCAAGTGCAATTTGCGCAAAGGATCCCGGTCCTTGCGGCATTCGGGCCTGTCGCTCCGCCGC
GCGCCGCGCCAGCCGGAGGCGGCGGAGTTGCACAATCAGGGACGGAAGTTCCCGCCGAACTACCTGCACGAAAGCTGGAT
GGATTTCCTTTATTGGGATTCAGAACTGGAGGCCTAG

Upstream 100 bases:

>100_bases
GGTCGCGCCTAGATATAGTGGGGCAACAATGACGACGGCGGCTTGGGCGGGGGCTCTCGCCCTGGGGCCTGATGCGGCGA
ACCGGGTGGGATAGACTGTG

Downstream 100 bases:

>100_bases
GCGCGCGGCGTCGGCCACGGGATTTGAGTTGTATTTGCCAAGATGAAGGAGAGCGTGTCGCGGGGTGACAGGCGTGGCGG
GCGGGTCTAGCGTAGCGGGA

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; Endonuclease; HNH Endonuclease Domain Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MQASDEIDFKTSFVRAPGALKHNPALVLNADYRPLSYLPLSLWPWQEAVKAVYLDRVQIVAEYDDFVHSPSTSIRIPSVV
VLRDYVKPQKRVAFTRFNLFLRDHFSCQYCGATGDLTFDHVVPRASGGVTSWENVVAACSKCNLRKGSRSLRHSGLSLRR
APRQPEAAELHNQGRKFPPNYLHESWMDFLYWDSELEA

Sequences:

>Translated_198_residues
MQASDEIDFKTSFVRAPGALKHNPALVLNADYRPLSYLPLSLWPWQEAVKAVYLDRVQIVAEYDDFVHSPSTSIRIPSVV
VLRDYVKPQKRVAFTRFNLFLRDHFSCQYCGATGDLTFDHVVPRASGGVTSWENVVAACSKCNLRKGSRSLRHSGLSLRR
APRQPEAAELHNQGRKFPPNYLHESWMDFLYWDSELEA
>Mature_198_residues
MQASDEIDFKTSFVRAPGALKHNPALVLNADYRPLSYLPLSLWPWQEAVKAVYLDRVQIVAEYDDFVHSPSTSIRIPSVV
VLRDYVKPQKRVAFTRFNLFLRDHFSCQYCGATGDLTFDHVVPRASGGVTSWENVVAACSKCNLRKGSRSLRHSGLSLRR
APRQPEAAELHNQGRKFPPNYLHESWMDFLYWDSELEA

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22627; Mature: 22627

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQASDEIDFKTSFVRAPGALKHNPALVLNADYRPLSYLPLSLWPWQEAVKAVYLDRVQIV
CCCCCCCCHHHHEEECCCCCCCCCEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHH
AEYDDFVHSPSTSIRIPSVVVLRDYVKPQKRVAFTRFNLFLRDHFSCQYCGATGDLTFDH
HHHHHHHCCCCCCEECCCCEEHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
VVPRASGGVTSWENVVAACSKCNLRKGSRSLRHSGLSLRRAPRQPEAAELHNQGRKFPPN
HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHCCCCCCHH
YLHESWMDFLYWDSELEA
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQASDEIDFKTSFVRAPGALKHNPALVLNADYRPLSYLPLSLWPWQEAVKAVYLDRVQIV
CCCCCCCCHHHHEEECCCCCCCCCEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHH
AEYDDFVHSPSTSIRIPSVVVLRDYVKPQKRVAFTRFNLFLRDHFSCQYCGATGDLTFDH
HHHHHHHCCCCCCEECCCCEEHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
VVPRASGGVTSWENVVAACSKCNLRKGSRSLRHSGLSLRRAPRQPEAAELHNQGRKFPPN
HCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHCCCCCCHH
YLHESWMDFLYWDSELEA
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA