Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054425

Identifier: 89054425

GI number: 89054425

Start: 1923777

End: 1925252

Strand: Direct

Name: 89054425

Synonym: Jann_1934

Alternate gene names: NA

Gene position: 1923777-1925252 (Clockwise)

Preceding gene: 89054424

Following gene: 89054426

Centisome position: 44.55

GC content: 66.94

Gene sequence:

>1476_bases
ATGGGCCAGGACAACGGGCAGTATTGGGACCACGAAGCCGGGGACCAGACGCAAGCGTCTGAACCTGCGCTTCAAGACGT
GTCTATCCCTGAGACGCCCCCTGCATTCGATGGCTACGACCTGCTGGATGTGCCTTTGGGCGATCTGATGCGCGGGGAAC
GGGCGACCCTCGGCAAGTCTCTTCTGGATGTGGAGCGGGAGCTTCGCATTCGCGCCACCTACATCGCCGCGATTGAAAAC
GCCGATGTCGGGGCCTTCCAATCCCAGGGCTTCATTGCCGGTTACGTCCGCTCCTACGCGCGCTACCTTGGCATTGACCC
CGAATGGACCTTCCGCCGCTTCTGCGATGAGACGGGGTTTCGGGGCATCCATGGCAGCGCGACCCATCAGGCCTCCGACG
TCAAGCGCTCGGTCTCCCGTGCGCCGCGCCGGGTTGATCCCAATGAGGTCATGGTCTCGACCCGTATTTCCTATGCGCCA
ACGCGCCACAGCCTGATGTCGCGGGTCGAACCGGGTGCGCTCGGGTCGATCGCCGTCGTCCTCGTGCTCGCGATGGGCAT
CGGCTACGGGGCCTGGGCGATCCTGCATGACATCCAGCGCCTCCAGATTGCCCCGATTGATGAGGCCCCCGCCGTGCCGC
TGGCGCAGCTTGATCCGCTGGTGGGCGTCACCTCCGGCTCTAACGGGTCCACCGGCACCAACGGATTTGACGGCGACCAT
ACATTCGACATCGCCATGCCCGGCCCGGAAACGGGCAATGCGCTCTACCGGCCCCAGGCCCTTGAAGCGCCGGTTCTGAC
GCCGCGCGATGGTGCGCTCGGTACACTCAACCCCGATGAGGTCGGCACCCTGTCGGGCGTCACGCAAACCGCGACCGCTG
CCCCCGCCGCGACCGCGCCTGCCACGCCCCCCGTTGCGGATGGCTCCGTTCAGGTCACCGCCGGTCGCGCCGATGAGGTG
ATGATTTTCGCCACCCGTCCCACCTGGGTCCGCGTCACGTCCGCCGATGGCTCCACCATCTACGAGGCGACGCTGAATGC
GGGCGACAGCTACGTGGTGCCTGATACCGATGGCGCGCCGCGCCTGCGATCAGGCAATGCGGGCTCTCTCTACTTCGCCG
TGAACGGCGTGGCCCTTGGCCCCGCAGGCCCCGGTGCCACCATCGTGCGCGATGTGGAGCTGACCGCCGATGCCGTCACC
GCCACCTATCAGATGGCCGATACCGAGGCGGATCCCGACCTCACTCAGGTCGCCTCCCTGATGTTTGACGGGGCTGATGT
GCCCGATGTGGCCCCCGTCGTGCCGGACCAGCCCGCGGCCACCGCCTACAACCCCACGGATCCCGCGCCGGCACCCCTGA
CGCTATTCCCGGACATCCCCTCTGACGTCGCCGCTGCGATCATCGCCAGCAATGCGCTGCCCGTCTCCGTTCAGTCGCCC
ACAACCGACGATCCGCGCCCGATCCCACGCCCCTGA

Upstream 100 bases:

>100_bases
AGGCCCTTTGGGAATCATCTGCGTTGGGGTAACATCTAGGGACACTTGGGCGGACAACCACTAGCAATAGTGGGCCCACC
ATAGAATCGGGGCAGGCCGC

Downstream 100 bases:

>100_bases
CGCCGTCCGTGCCCCGCGCTACTCGCGCCCCTGACGCAGCCCGTGATTGCACCGCCCGTCCGCCGCGCCTCTCCAATACG
CCCCGCCTGCGCGTCCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MGQDNGQYWDHEAGDQTQASEPALQDVSIPETPPAFDGYDLLDVPLGDLMRGERATLGKSLLDVERELRIRATYIAAIEN
ADVGAFQSQGFIAGYVRSYARYLGIDPEWTFRRFCDETGFRGIHGSATHQASDVKRSVSRAPRRVDPNEVMVSTRISYAP
TRHSLMSRVEPGALGSIAVVLVLAMGIGYGAWAILHDIQRLQIAPIDEAPAVPLAQLDPLVGVTSGSNGSTGTNGFDGDH
TFDIAMPGPETGNALYRPQALEAPVLTPRDGALGTLNPDEVGTLSGVTQTATAAPAATAPATPPVADGSVQVTAGRADEV
MIFATRPTWVRVTSADGSTIYEATLNAGDSYVVPDTDGAPRLRSGNAGSLYFAVNGVALGPAGPGATIVRDVELTADAVT
ATYQMADTEADPDLTQVASLMFDGADVPDVAPVVPDQPAATAYNPTDPAPAPLTLFPDIPSDVAAAIIASNALPVSVQSP
TTDDPRPIPRP

Sequences:

>Translated_491_residues
MGQDNGQYWDHEAGDQTQASEPALQDVSIPETPPAFDGYDLLDVPLGDLMRGERATLGKSLLDVERELRIRATYIAAIEN
ADVGAFQSQGFIAGYVRSYARYLGIDPEWTFRRFCDETGFRGIHGSATHQASDVKRSVSRAPRRVDPNEVMVSTRISYAP
TRHSLMSRVEPGALGSIAVVLVLAMGIGYGAWAILHDIQRLQIAPIDEAPAVPLAQLDPLVGVTSGSNGSTGTNGFDGDH
TFDIAMPGPETGNALYRPQALEAPVLTPRDGALGTLNPDEVGTLSGVTQTATAAPAATAPATPPVADGSVQVTAGRADEV
MIFATRPTWVRVTSADGSTIYEATLNAGDSYVVPDTDGAPRLRSGNAGSLYFAVNGVALGPAGPGATIVRDVELTADAVT
ATYQMADTEADPDLTQVASLMFDGADVPDVAPVVPDQPAATAYNPTDPAPAPLTLFPDIPSDVAAAIIASNALPVSVQSP
TTDDPRPIPRP
>Mature_490_residues
GQDNGQYWDHEAGDQTQASEPALQDVSIPETPPAFDGYDLLDVPLGDLMRGERATLGKSLLDVERELRIRATYIAAIENA
DVGAFQSQGFIAGYVRSYARYLGIDPEWTFRRFCDETGFRGIHGSATHQASDVKRSVSRAPRRVDPNEVMVSTRISYAPT
RHSLMSRVEPGALGSIAVVLVLAMGIGYGAWAILHDIQRLQIAPIDEAPAVPLAQLDPLVGVTSGSNGSTGTNGFDGDHT
FDIAMPGPETGNALYRPQALEAPVLTPRDGALGTLNPDEVGTLSGVTQTATAAPAATAPATPPVADGSVQVTAGRADEVM
IFATRPTWVRVTSADGSTIYEATLNAGDSYVVPDTDGAPRLRSGNAGSLYFAVNGVALGPAGPGATIVRDVELTADAVTA
TYQMADTEADPDLTQVASLMFDGADVPDVAPVVPDQPAATAYNPTDPAPAPLTLFPDIPSDVAAAIIASNALPVSVQSPT
TDDPRPIPRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51351; Mature: 51219

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQDNGQYWDHEAGDQTQASEPALQDVSIPETPPAFDGYDLLDVPLGDLMRGERATLGKS
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEECCCHHHHHCCCHHHHHHH
LLDVERELRIRATYIAAIENADVGAFQSQGFIAGYVRSYARYLGIDPEWTFRRFCDETGF
HHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
RGIHGSATHQASDVKRSVSRAPRRVDPNEVMVSTRISYAPTRHSLMSRVEPGALGSIAVV
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHH
LVLAMGIGYGAWAILHDIQRLQIAPIDEAPAVPLAQLDPLVGVTSGSNGSTGTNGFDGDH
HHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCE
TFDIAMPGPETGNALYRPQALEAPVLTPRDGALGTLNPDEVGTLSGVTQTATAAPAATAP
EEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCC
ATPPVADGSVQVTAGRADEVMIFATRPTWVRVTSADGSTIYEATLNAGDSYVVPDTDGAP
CCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCEECCCCCCCC
RLRSGNAGSLYFAVNGVALGPAGPGATIVRDVELTADAVTATYQMADTEADPDLTQVASL
CCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEECHHHHEEEEEECCCCCCCCHHHHHHH
MFDGADVPDVAPVVPDQPAATAYNPTDPAPAPLTLFPDIPSDVAAAIIASNALPVSVQSP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCC
TTDDPRPIPRP
CCCCCCCCCCC
>Mature Secondary Structure 
GQDNGQYWDHEAGDQTQASEPALQDVSIPETPPAFDGYDLLDVPLGDLMRGERATLGKS
CCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEECCCHHHHHCCCHHHHHHH
LLDVERELRIRATYIAAIENADVGAFQSQGFIAGYVRSYARYLGIDPEWTFRRFCDETGF
HHHHHHHHEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
RGIHGSATHQASDVKRSVSRAPRRVDPNEVMVSTRISYAPTRHSLMSRVEPGALGSIAVV
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHH
LVLAMGIGYGAWAILHDIQRLQIAPIDEAPAVPLAQLDPLVGVTSGSNGSTGTNGFDGDH
HHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCCEEEECCCCCCCCCCCCCCCE
TFDIAMPGPETGNALYRPQALEAPVLTPRDGALGTLNPDEVGTLSGVTQTATAAPAATAP
EEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCC
ATPPVADGSVQVTAGRADEVMIFATRPTWVRVTSADGSTIYEATLNAGDSYVVPDTDGAP
CCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCEECCCCCCCC
RLRSGNAGSLYFAVNGVALGPAGPGATIVRDVELTADAVTATYQMADTEADPDLTQVASL
CCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEECHHHHEEEEEECCCCCCCCHHHHHHH
MFDGADVPDVAPVVPDQPAATAYNPTDPAPAPLTLFPDIPSDVAAAIIASNALPVSVQSP
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEEECCC
TTDDPRPIPRP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA