Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is 89054396
Identifier: 89054396
GI number: 89054396
Start: 1894793
End: 1895212
Strand: Reverse
Name: 89054396
Synonym: Jann_1905
Alternate gene names: NA
Gene position: 1895212-1894793 (Counterclockwise)
Preceding gene: 89054398
Following gene: 89054395
Centisome position: 43.89
GC content: 60.0
Gene sequence:
>420_bases ATGACCACCACAACCGCCCCCGCACCGGTCCACACCCATGACAGCCGAAGCTGGTTTGGTAAGGCCGAAGATTGGCTCGA TGCACGCGGCAAAGGCGCATGGATCGCGGCGATGGTGCTTGGGTTCATCTTTTTCTGGCCCATCGGCCTCGCCCTTCTTG CCTACATGATATGGAGCAAACGCATGTTCAACGGATCCTGCAAATCTCGCCGCCACAGCCACGGGCACCGGTTCAACTCA TCCGGCAACACCGCGTTCGATGCCTACAAGGCCGACACGCTGAAGCGCCTGGAAGAGGAGCAGGGCGCGTTTGAAGCCTT CCTGCAACGCCTGCGCGACAGTAAGGACAAGTCCGAGTTTGACGCGTTCATGGAAGATCGTGCCAAAGTGGCCAAGGCCG ACGACACCGCCGAGGCGTAA
Upstream 100 bases:
>100_bases AAGATTCACATACCCCCTTGCGGGACCACCACGACATCCCATATGAGTTAATGTGATTAACATTTACATTCACTGCAACA CACAAACCGAGGAGACACCC
Downstream 100 bases:
>100_bases GTCATCCCCCCTGCCCTGCACGCGCGGTTTCTGCGCCGCGTGCAGGGTCTTTCCCCCTTCTCAAAGGCCCAGATCACGCC CATGTCTATCGCCATGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTTTTAPAPVHTHDSRSWFGKAEDWLDARGKGAWIAAMVLGFIFFWPIGLALLAYMIWSKRMFNGSCKSRRHSHGHRFNS SGNTAFDAYKADTLKRLEEEQGAFEAFLQRLRDSKDKSEFDAFMEDRAKVAKADDTAEA
Sequences:
>Translated_139_residues MTTTTAPAPVHTHDSRSWFGKAEDWLDARGKGAWIAAMVLGFIFFWPIGLALLAYMIWSKRMFNGSCKSRRHSHGHRFNS SGNTAFDAYKADTLKRLEEEQGAFEAFLQRLRDSKDKSEFDAFMEDRAKVAKADDTAEA >Mature_138_residues TTTTAPAPVHTHDSRSWFGKAEDWLDARGKGAWIAAMVLGFIFFWPIGLALLAYMIWSKRMFNGSCKSRRHSHGHRFNSS GNTAFDAYKADTLKRLEEEQGAFEAFLQRLRDSKDKSEFDAFMEDRAKVAKADDTAEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15755; Mature: 15624
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTAPAPVHTHDSRSWFGKAEDWLDARGKGAWIAAMVLGFIFFWPIGLALLAYMIWSK CCCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMFNGSCKSRRHSHGHRFNSSGNTAFDAYKADTLKRLEEEQGAFEAFLQRLRDSKDKSEF HHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHH DAFMEDRAKVAKADDTAEA HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTTTAPAPVHTHDSRSWFGKAEDWLDARGKGAWIAAMVLGFIFFWPIGLALLAYMIWSK CCCCCCCCCCCCCCCHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMFNGSCKSRRHSHGHRFNSSGNTAFDAYKADTLKRLEEEQGAFEAFLQRLRDSKDKSEF HHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHH DAFMEDRAKVAKADDTAEA HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA