Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 89054380

GI number: 89054380

Start: 1878120

End: 1879382

Strand: Reverse

Name: yeaW [H]

Synonym: Jann_1889

Alternate gene names: 89054380

Gene position: 1879382-1878120 (Counterclockwise)

Preceding gene: 89054381

Following gene: 89054379

Centisome position: 43.52

GC content: 63.5

Gene sequence:

>1263_bases
ATGAAAGGCGGACCATGTCTGTCCGCGCCAAGGTTTTGTCGCTCTGCGGCAAGATTTCGAGGCCGCGCGTGCCCAAGCTA
CTCCTGTCCCCGACGACAGACAGCAGGAGCGCCCGACATGCCAGACGACCACACCCGTTCGCTCGCCGATGTCATGGCCC
CAATCGATCGCGCGCGCGGTCTGCCCAACAGCCATTACACAGATCCCGACACAATCGCGGCAGAGAATGCCGCTGTCCTG
CACGCCGGATGGGCCGCACTGGCCGTGGGGGCCGATGTGCCGGAACCGGGGGATGCGAAACCGTTTGAGTTCCTGGGCCA
ACCGCTTCTGCTTCTGCGCGATGACGACGGCGCCGTCCGTGTCTTCTTCAACATCTGCCGCCATCGCGGCATGATCCTGG
TGGATGCGCCACGCAAGATCGAAGGGGCGATCCGCTGCCCCTACCATTCCTGGTGCTATGCCAAATCCGGCAAACTCGTC
GCCACGCCCCATGTGGGTGGACCGGGGCAGAACGCACACCCCGGGATTGACCGCACCACCCTTGGCCTGGCCGAGGTCCG
CAGCCATATCTGGCGCGATGTGGTCTTCATTAACCTCTCAGGCGAGGCCGCCCCGTTTGAAGACGTCCACGCCGATCTTC
TGCAAAGGTGGGCGGAGTTCGACCAACCCATGCACCATGGCGGGCCCGACAGCACCTTCACGCTGGATCTGGCGACGAAC
TGGAAGCTGGCGGTGGAGAATTACTGCGAAAGCTACCACCTGCCCTGGGTGCATCCGTCGCTCAACACCTACTCCCGGCT
GGAGGATCACTATCATATCGAGGCACCGGGCCAATTCTCGGGCCAGGGCACCTATGTCTACCGCCAACTGACCGGAGAGG
ACGGCGCAACTTTCCCCGATTTCGACGGTCTCAGCGCCCATTGGGATGCGGGCGCAGAATACATCTCGGTCTTTCCCAAC
GTCCTGATGGGGGTTCACCGCGACCACGCCTATGCCATTGTGCTGGAGCCTGTGGCCCACAACCGCACCCGCGAACACGT
CCACATATACTACCCCAGCGCCGACACCGACGCGGGCCTGCGCGCCAAGAATGCGCGGCAATGGAAGGATGTGTTCGAAG
AAGACATCTTCGTGGTGGAAGGCATGCAGAAGGGCCGCGCGGCGGATGGCTTTGACGGGGGCCGGTTTTCACCCGCCATG
GACGGGCCGACGCATCTGTTCCACGCCTGGGTCGCCGCGAAGCTGGACGCCCACGGGACCTGA

Upstream 100 bases:

>100_bases
TGGGCACCGTCACGTCCCGGCTGGCGCGGGGCCGCGCGGCCATGCGGGAGGCATTGGACCTGCCGCCCGGCGCGCCGGTG
ACGGACCTTCTTGGGGGAGA

Downstream 100 bases:

>100_bases
CCATGACCGCTGACCGGTTCGAAGCCGCGCTGCGCACCGCGCGGGGGACCGGCGACTGGTCCGACGTGATCGCGCTGTAT
CTCAAGGCTGCGGAGGCAGA

Product: Rieske (2Fe-2S) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKGGPCLSAPRFCRSAARFRGRACPSYSCPRRQTAGAPDMPDDHTRSLADVMAPIDRARGLPNSHYTDPDTIAAENAAVL
HAGWAALAVGADVPEPGDAKPFEFLGQPLLLLRDDDGAVRVFFNICRHRGMILVDAPRKIEGAIRCPYHSWCYAKSGKLV
ATPHVGGPGQNAHPGIDRTTLGLAEVRSHIWRDVVFINLSGEAAPFEDVHADLLQRWAEFDQPMHHGGPDSTFTLDLATN
WKLAVENYCESYHLPWVHPSLNTYSRLEDHYHIEAPGQFSGQGTYVYRQLTGEDGATFPDFDGLSAHWDAGAEYISVFPN
VLMGVHRDHAYAIVLEPVAHNRTREHVHIYYPSADTDAGLRAKNARQWKDVFEEDIFVVEGMQKGRAADGFDGGRFSPAM
DGPTHLFHAWVAAKLDAHGT

Sequences:

>Translated_420_residues
MKGGPCLSAPRFCRSAARFRGRACPSYSCPRRQTAGAPDMPDDHTRSLADVMAPIDRARGLPNSHYTDPDTIAAENAAVL
HAGWAALAVGADVPEPGDAKPFEFLGQPLLLLRDDDGAVRVFFNICRHRGMILVDAPRKIEGAIRCPYHSWCYAKSGKLV
ATPHVGGPGQNAHPGIDRTTLGLAEVRSHIWRDVVFINLSGEAAPFEDVHADLLQRWAEFDQPMHHGGPDSTFTLDLATN
WKLAVENYCESYHLPWVHPSLNTYSRLEDHYHIEAPGQFSGQGTYVYRQLTGEDGATFPDFDGLSAHWDAGAEYISVFPN
VLMGVHRDHAYAIVLEPVAHNRTREHVHIYYPSADTDAGLRAKNARQWKDVFEEDIFVVEGMQKGRAADGFDGGRFSPAM
DGPTHLFHAWVAAKLDAHGT
>Mature_420_residues
MKGGPCLSAPRFCRSAARFRGRACPSYSCPRRQTAGAPDMPDDHTRSLADVMAPIDRARGLPNSHYTDPDTIAAENAAVL
HAGWAALAVGADVPEPGDAKPFEFLGQPLLLLRDDDGAVRVFFNICRHRGMILVDAPRKIEGAIRCPYHSWCYAKSGKLV
ATPHVGGPGQNAHPGIDRTTLGLAEVRSHIWRDVVFINLSGEAAPFEDVHADLLQRWAEFDQPMHHGGPDSTFTLDLATN
WKLAVENYCESYHLPWVHPSLNTYSRLEDHYHIEAPGQFSGQGTYVYRQLTGEDGATFPDFDGLSAHWDAGAEYISVFPN
VLMGVHRDHAYAIVLEPVAHNRTREHVHIYYPSADTDAGLRAKNARQWKDVFEEDIFVVEGMQKGRAADGFDGGRFSPAM
DGPTHLFHAWVAAKLDAHGT

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=342, Percent_Identity=26.6081871345029, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788888, Length=204, Percent_Identity=28.4313725490196, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 46335; Mature: 46335

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGPCLSAPRFCRSAARFRGRACPSYSCPRRQTAGAPDMPDDHTRSLADVMAPIDRARG
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LPNSHYTDPDTIAAENAAVLHAGWAALAVGADVPEPGDAKPFEFLGQPLLLLRDDDGAVR
CCCCCCCCCCHHCCCCCEEEECCHHHEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHH
VFFNICRHRGMILVDAPRKIEGAIRCPYHSWCYAKSGKLVATPHVGGPGQNAHPGIDRTT
HHHHHHHHCCEEEEECCCCCCCCEECCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHH
LGLAEVRSHIWRDVVFINLSGEAAPFEDVHADLLQRWAEFDQPMHHGGPDSTFTLDLATN
HHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCC
WKLAVENYCESYHLPWVHPSLNTYSRLEDHYHIEAPGQFSGQGTYVYRQLTGEDGATFPD
CCHHHHHHHHHCCCCEECCCCCHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCC
FDGLSAHWDAGAEYISVFPNVLMGVHRDHAYAIVLEPVAHNRTREHVHIYYPSADTDAGL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCEEEEEECCCCCCCCC
RAKNARQWKDVFEEDIFVVEGMQKGRAADGFDGGRFSPAMDGPTHLFHAWVAAKLDAHGT
CCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGGPCLSAPRFCRSAARFRGRACPSYSCPRRQTAGAPDMPDDHTRSLADVMAPIDRARG
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
LPNSHYTDPDTIAAENAAVLHAGWAALAVGADVPEPGDAKPFEFLGQPLLLLRDDDGAVR
CCCCCCCCCCHHCCCCCEEEECCHHHEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHH
VFFNICRHRGMILVDAPRKIEGAIRCPYHSWCYAKSGKLVATPHVGGPGQNAHPGIDRTT
HHHHHHHHCCEEEEECCCCCCCCEECCCCCEEEECCCCEEECCCCCCCCCCCCCCCCHHH
LGLAEVRSHIWRDVVFINLSGEAAPFEDVHADLLQRWAEFDQPMHHGGPDSTFTLDLATN
HHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEECCC
WKLAVENYCESYHLPWVHPSLNTYSRLEDHYHIEAPGQFSGQGTYVYRQLTGEDGATFPD
CCHHHHHHHHHCCCCEECCCCCHHHHHCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCC
FDGLSAHWDAGAEYISVFPNVLMGVHRDHAYAIVLEPVAHNRTREHVHIYYPSADTDAGL
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCEEEEEECCCCCCCCC
RAKNARQWKDVFEEDIFVVEGMQKGRAADGFDGGRFSPAMDGPTHLFHAWVAAKLDAHGT
CCCCHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]