Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is yhiN [H]

Identifier: 89054351

GI number: 89054351

Start: 1847563

End: 1848708

Strand: Reverse

Name: yhiN [H]

Synonym: Jann_1860

Alternate gene names: 89054351

Gene position: 1848708-1847563 (Counterclockwise)

Preceding gene: 89054352

Following gene: 89054349

Centisome position: 42.81

GC content: 63.18

Gene sequence:

>1146_bases
ATGGTCCACCACGTCCAAACCCTCATTCTCGGCGCCGGGGCCGCTGGCCTCATGTGTGCCGCCCATGCCGGGCCGGACAC
GCTGGTGGTTGACCACGCTAAGGCCCCGGGCGAGAAGATCCGCATCTCCGGTGGCGGGCGCTGCAACTTCACCAATATGT
ATGCGGAACCGGCGAATTTCTTAAGCGAAAACATCCACTTCGCCAAGTCCGCCCTATCGCGCTACACGCAATGGGACTTC
CTCGATCTCGTCCAGAAACACGACATTCCCTACCATGAGAAAACCCTGGGCCAGCTCTTCTGCGACCGCTCCGCCAAGGA
CATCATCGCCATGCTTCTGGCGGAAATGGGCCCGGCCAAGCTTTGGCTCCAGACCGACATCGGTGAGGTGGCCCATCGCG
ACGGCCTCTTCCACGTCACGCTGACGCGAGAGGGCAAACGTCACGGCGTCACCGCCCGCAATCTCGTGCTCGCCACGGGC
GGGAAATCCATCCCCAAAATGGGCGCCACCGGCCTGGCCTACCGCATCGCAGAGCAATTCGGCCACCGCATCACCGACAC
CCGCCCTGCCCTTGTCCCATTGACGTTTGAGGGCGAGGTGAAGGCGCAATTCGCCGCTTTGTCCGGCACTTCGGTGCCCG
CGCGCGTGGCCTGCAACGGCACCCGTTTTGACGAGGGGATGCTGTTCACGCATCGGGGGCTGTCGGGCCCGTCGATCCTG
CAAATCTCATCCTATTGGGCGGAGGGCGATACGTTGTCGCTGCATCTTCTGCCCGAAGCGGACCTGTTTGAGGTGCTTCG
TGCCCGTCGCACGCAGGCTGGCGGCAAGGCGCTCACCAGCGTTTTGGCCGAGCTTTTGCCGAAGAAACTCGTGGCCCATC
TGGCGGAGGTTTGGGGCCTGACCGGCAACCTTGCCGATCAATCCGATATCGCCTTGCGCGCCCTGACCGACCAGCTCACC
GCCTGGCCCGTTACGCCGACCTCGTCGGAGGGCTACCGCACCGCTGAAGTCACGCTCGGCGGCATCGCGACTGAAGGGAT
GTCCTCAAAAACCATGGAAAGCCAGCATGTTAAGGGCCTCTACGTGATCGGAGAGGCGGTGGACGTGACCGGCTGGCTGG
GGGGATACAACTTCCAATGGGCGTAG

Upstream 100 bases:

>100_bases
GGACGAGGACCGCCTGCAAGAGGTTGTCTGGGCGTGGGATCAGTTGAAGGTCAGCCGCAACTTCGCCGACTGACAGCGCG
GTCTTGCCTGAGGGCTCCCT

Downstream 100 bases:

>100_bases
TCGTCGGGCGTTGCGGCGGGCCGCGCGATCCAACATGCCTGAGCCCGCTTCACGCCCGCCAGAACGTCGCCGTGAACAAC
ACCAGCACCGCCATCAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANFLSENIHFAKSALSRYTQWDF
LDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAKLWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATG
GKSIPKMGATGLAYRIAEQFGHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL
QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGLTGNLADQSDIALRALTDQLT
AWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGLYVIGEAVDVTGWLGGYNFQWA

Sequences:

>Translated_381_residues
MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANFLSENIHFAKSALSRYTQWDF
LDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAKLWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATG
GKSIPKMGATGLAYRIAEQFGHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL
QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGLTGNLADQSDIALRALTDQLT
AWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGLYVIGEAVDVTGWLGGYNFQWA
>Mature_381_residues
MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANFLSENIHFAKSALSRYTQWDF
LDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAKLWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATG
GKSIPKMGATGLAYRIAEQFGHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL
QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGLTGNLADQSDIALRALTDQLT
AWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGLYVIGEAVDVTGWLGGYNFQWA

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0933 [H]

Homologues:

Organism=Escherichia coli, GI2367234, Length=370, Percent_Identity=50.8108108108108, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027
- InterPro:   IPR023166 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 41126; Mature: 41126

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANF
CCCHHEEHEECCCCHHHEEEECCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCHHHH
LSENIHFAKSALSRYTQWDFLDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAK
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE
LWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATGGKSIPKMGATGLAYRIAEQF
EEEECCHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
GHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL
CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCCEE
QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGL
EEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TGNLADQSDIALRALTDQLTAWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEECCCCCCCCHHHHCCCEE
YVIGEAVDVTGWLGGYNFQWA
EEEECEEEEEEECCCCCCCCC
>Mature Secondary Structure
MVHHVQTLILGAGAAGLMCAAHAGPDTLVVDHAKAPGEKIRISGGGRCNFTNMYAEPANF
CCCHHEEHEECCCCHHHEEEECCCCCEEEEECCCCCCCEEEECCCCEECCCCCCCCHHHH
LSENIHFAKSALSRYTQWDFLDLVQKHDIPYHEKTLGQLFCDRSAKDIIAMLLAEMGPAK
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCE
LWLQTDIGEVAHRDGLFHVTLTREGKRHGVTARNLVLATGGKSIPKMGATGLAYRIAEQF
EEEECCHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
GHRITDTRPALVPLTFEGEVKAQFAALSGTSVPARVACNGTRFDEGMLFTHRGLSGPSIL
CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCCCCCCEE
QISSYWAEGDTLSLHLLPEADLFEVLRARRTQAGGKALTSVLAELLPKKLVAHLAEVWGL
EEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TGNLADQSDIALRALTDQLTAWPVTPTSSEGYRTAEVTLGGIATEGMSSKTMESQHVKGL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCEECCCCCCCCHHHHCCCEE
YVIGEAVDVTGWLGGYNFQWA
EEEECEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]