Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

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The map label for this gene is 89054326

Identifier: 89054326

GI number: 89054326

Start: 1820971

End: 1821930

Strand: Reverse

Name: 89054326

Synonym: Jann_1835

Alternate gene names: NA

Gene position: 1821930-1820971 (Counterclockwise)

Preceding gene: 89054330

Following gene: 89054323

Centisome position: 42.19

GC content: 60.21

Gene sequence:

>960_bases
ATGGCACACGCTCAATCTACCGAGGTTTTCTTCATCGTCGATGGTCTGCGTCTTGAGGCGCAGGCCTGTTTGCTCGCACC
GTCCCTGAAGCGGCACCTGATGCCGCATCAGCGCGCCGTGGCGTATCTGCGCGAAGATTATCTGCCAAAGCTGGACGAGT
TCACCGTCGACGTTCTCGCCGCCTCGGACGTTGAAACGCGGGTCATTGCCGACACAAATGGTGGTCACGCGCCGTGGCTG
TCACCCTATCCGCATGGCAACAAGATTCTGGCCGCCGCGATGCCGCGTGACTGCGAGATATCAGTCTTTCTGGACACCGA
CACGATCCTGACCGAGCCCGTGGATTTTGCACAAGAACTTGGTGGTGCGCTGATCGCGGCCTGCGTGTCTGACTATGCGT
CCTCCGCCGGTACGCAGGAAGACTGGGAGGCATTCTACGCCGCCTATTCTCTTCCATTACCCAAGGATCGCGTACAGCTG
AACGGGGGGCGTCGCTTGTGGTCCTTGCCGTATTTCAACGCGGGCGTGATCGTGTTCCGCGAGCGCACGATCGACGGCAT
CCCGCTGGAGGTTGGCCGCGACTGGCTGCACACCGCCATGCATTTTGAGCGGGAAGTCACGCGTGACTACGGACGCTCCA
ACATTGATCAGTTCACGCTGCCTATTCTGGGTTACCTGCGCAAGATGCCCGTCAAGTCCATGGGTCAGCACATGAATTTC
AACATTCAGGCCTTTGGCGATGGCGAGGGTCAGCCTCAAAGCGTGGCCCATTATCATCGCATCGGCGCATTGTGGAAACA
CAAGGTCCATGGGCGCGAGGCGCTGGACACCCTGGCCGAGATTGCGGGGAGACGGGCGCCGGAGACATTTCTGGAGGTCT
TCGGGCTGGAAGCACGGCGCAAGAACATGAAGCATCACCTGCGCGCGATGGCGGAGGAGGCCCTGTCAGAGGCGGCTTGA

Upstream 100 bases:

>100_bases
ACACTTCGCATGTCATCGGCCGAATGTCGGTATTTGCGTCAAATTTTCGACAAACTTGCGGCCTAGCCCATAGCGAAACA
CAAGAAACGAGGCTCCAAGC

Downstream 100 bases:

>100_bases
TCCTGGCTTAACCCCGCGCCCCGATCCGGGCGCCGATCCAAAGAAAGAGCGCCAGCAAAAGCGCGACGCCCCCGCTTGTC
AAGATGATCAATTGCAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MAHAQSTEVFFIVDGLRLEAQACLLAPSLKRHLMPHQRAVAYLREDYLPKLDEFTVDVLAASDVETRVIADTNGGHAPWL
SPYPHGNKILAAAMPRDCEISVFLDTDTILTEPVDFAQELGGALIAACVSDYASSAGTQEDWEAFYAAYSLPLPKDRVQL
NGGRRLWSLPYFNAGVIVFRERTIDGIPLEVGRDWLHTAMHFEREVTRDYGRSNIDQFTLPILGYLRKMPVKSMGQHMNF
NIQAFGDGEGQPQSVAHYHRIGALWKHKVHGREALDTLAEIAGRRAPETFLEVFGLEARRKNMKHHLRAMAEEALSEAA

Sequences:

>Translated_319_residues
MAHAQSTEVFFIVDGLRLEAQACLLAPSLKRHLMPHQRAVAYLREDYLPKLDEFTVDVLAASDVETRVIADTNGGHAPWL
SPYPHGNKILAAAMPRDCEISVFLDTDTILTEPVDFAQELGGALIAACVSDYASSAGTQEDWEAFYAAYSLPLPKDRVQL
NGGRRLWSLPYFNAGVIVFRERTIDGIPLEVGRDWLHTAMHFEREVTRDYGRSNIDQFTLPILGYLRKMPVKSMGQHMNF
NIQAFGDGEGQPQSVAHYHRIGALWKHKVHGREALDTLAEIAGRRAPETFLEVFGLEARRKNMKHHLRAMAEEALSEAA
>Mature_318_residues
AHAQSTEVFFIVDGLRLEAQACLLAPSLKRHLMPHQRAVAYLREDYLPKLDEFTVDVLAASDVETRVIADTNGGHAPWLS
PYPHGNKILAAAMPRDCEISVFLDTDTILTEPVDFAQELGGALIAACVSDYASSAGTQEDWEAFYAAYSLPLPKDRVQLN
GGRRLWSLPYFNAGVIVFRERTIDGIPLEVGRDWLHTAMHFEREVTRDYGRSNIDQFTLPILGYLRKMPVKSMGQHMNFN
IQAFGDGEGQPQSVAHYHRIGALWKHKVHGREALDTLAEIAGRRAPETFLEVFGLEARRKNMKHHLRAMAEEALSEAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35751; Mature: 35620

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAQSTEVFFIVDGLRLEAQACLLAPSLKRHLMPHQRAVAYLREDYLPKLDEFTVDVLA
CCCCCCCEEEEEEECCEEHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHEEE
ASDVETRVIADTNGGHAPWLSPYPHGNKILAAAMPRDCEISVFLDTDTILTEPVDFAQEL
ECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHCCCHHHHHHH
GGALIAACVSDYASSAGTQEDWEAFYAAYSLPLPKDRVQLNGGRRLWSLPYFNAGVIVFR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEECCCCEEEECCCCCCCEEEEE
ERTIDGIPLEVGRDWLHTAMHFEREVTRDYGRSNIDQFTLPILGYLRKMPVKSMGQHMNF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCE
NIQAFGDGEGQPQSVAHYHRIGALWKHKVHGREALDTLAEIAGRRAPETFLEVFGLEARR
EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
KNMKHHLRAMAEEALSEAA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHAQSTEVFFIVDGLRLEAQACLLAPSLKRHLMPHQRAVAYLREDYLPKLDEFTVDVLA
CCCCCCEEEEEEECCEEHHHHHHHCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHEEE
ASDVETRVIADTNGGHAPWLSPYPHGNKILAAAMPRDCEISVFLDTDTILTEPVDFAQEL
ECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCHHHCCCHHHHHHH
GGALIAACVSDYASSAGTQEDWEAFYAAYSLPLPKDRVQLNGGRRLWSLPYFNAGVIVFR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEECCCCEEEECCCCCCCEEEEE
ERTIDGIPLEVGRDWLHTAMHFEREVTRDYGRSNIDQFTLPILGYLRKMPVKSMGQHMNF
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCE
NIQAFGDGEGQPQSVAHYHRIGALWKHKVHGREALDTLAEIAGRRAPETFLEVFGLEARR
EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
KNMKHHLRAMAEEALSEAA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA