Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
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Accession | NC_007802 |
Length | 4,317,977 |
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The map label for this gene is yebE [C]
Identifier: 89054291
GI number: 89054291
Start: 1789104
End: 1790009
Strand: Reverse
Name: yebE [C]
Synonym: Jann_1800
Alternate gene names: 89054291
Gene position: 1790009-1789104 (Counterclockwise)
Preceding gene: 89054293
Following gene: 89054290
Centisome position: 41.45
GC content: 67.44
Gene sequence:
>906_bases ATGAGCCTTTTAAGAACTTTGGCCACGGTGGCCGTTGGTGTGGCAGCGGCCCGGGGCGCGCGCAGTCTGGCGAACCGGGG CAACCGGGAGGAGCGGCGCGGCGGGGGCGGCGGGCTGCTCGACAATCTGCGGGGCCAGGATGACCGCGGCGGCAGCGGCT TGGGCGCAATTCTCGGCGGTAGCGGATCGCAGGGGCGCTCTGGCGGCGGGCTGGGGGATCTGCTGGAGGAATTCGGCGGC TCCGGCGCGCTTGGAGGTTTGGGCAGCATGCTTGGCGGCGGGGCCGCAGGGGGCATGTTGGGCGGTTTGCTGGGGGGCGG CGGCGGTGGCGGCACGTCAGCGTTTGGGCGGCGGCTCAATCAATCCCTGATGAGTGGGGGCGAGCCGGAGGATGAGCCGA CGGAGGATGAGGAGGCCATGGCGGCCCTGATGATCCGCGCGATGATCATGGCGGCAAAGTCCGATGGCCGCATCGACCGC GACGAGCGCGCCATGCTGACCGACCGTCTCGGTGATCTGAGTGCCCGTGAGCGACAATTTGTCGAGGATGAGTTGAACGC CCGCATTGATGTGCGCGATTTCGCCCGCGACGTACCAGATCATCCGGGCCTGCGCGCGCAGATCTTTGCCGCCGCCATGT CCGCAATTGATATCGATAGCCCGCGGGAGCGGGAGTTTGCCGAAGACCTCGCCAATGCGCTGGGGTTGGAGGAGAAGGCG CGCGGACACGTGCAACAGCGAATGTCGAGCGCCTATGGCGCGGCATCTGAGGAGTCCTGGCAGAAGCAGGATATCGATCG CGCCTATTCGCGACCGATTCAGGCCCCAGCCAGTGCCGGCGGGCCAGTTCGTGGCACCAAGGGTATGCAGGGCACCCCGG GAACCGGTCGCCCGTATCGCAAATAG
Upstream 100 bases:
>100_bases GCTCTGTCGCCGTCCCGGCACCGGAATACCGATGACGCTTTGCCGAAGCCGTGCCGTCTGCCATGGTGGGCGACATATTT TGATCTGGGAGGATTGGGCC
Downstream 100 bases:
>100_bases CGGCCTCCCATGGCTGCCATCCCGCGCGGGCTTTATCCGCGCGGGCAAATCCCCTAGACCCCGCCCTGACATCGCTTCCC CCTTCCCCCGTATTCCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSLLRTLATVAVGVAAARGARSLANRGNREERRGGGGGLLDNLRGQDDRGGSGLGAILGGSGSQGRSGGGLGDLLEEFGG SGALGGLGSMLGGGAAGGMLGGLLGGGGGGGTSAFGRRLNQSLMSGGEPEDEPTEDEEAMAALMIRAMIMAAKSDGRIDR DERAMLTDRLGDLSARERQFVEDELNARIDVRDFARDVPDHPGLRAQIFAAAMSAIDIDSPREREFAEDLANALGLEEKA RGHVQQRMSSAYGAASEESWQKQDIDRAYSRPIQAPASAGGPVRGTKGMQGTPGTGRPYRK
Sequences:
>Translated_301_residues MSLLRTLATVAVGVAAARGARSLANRGNREERRGGGGGLLDNLRGQDDRGGSGLGAILGGSGSQGRSGGGLGDLLEEFGG SGALGGLGSMLGGGAAGGMLGGLLGGGGGGGTSAFGRRLNQSLMSGGEPEDEPTEDEEAMAALMIRAMIMAAKSDGRIDR DERAMLTDRLGDLSARERQFVEDELNARIDVRDFARDVPDHPGLRAQIFAAAMSAIDIDSPREREFAEDLANALGLEEKA RGHVQQRMSSAYGAASEESWQKQDIDRAYSRPIQAPASAGGPVRGTKGMQGTPGTGRPYRK >Mature_300_residues SLLRTLATVAVGVAAARGARSLANRGNREERRGGGGGLLDNLRGQDDRGGSGLGAILGGSGSQGRSGGGLGDLLEEFGGS GALGGLGSMLGGGAAGGMLGGLLGGGGGGGTSAFGRRLNQSLMSGGEPEDEPTEDEEAMAALMIRAMIMAAKSDGRIDRD ERAMLTDRLGDLSARERQFVEDELNARIDVRDFARDVPDHPGLRAQIFAAAMSAIDIDSPREREFAEDLANALGLEEKAR GHVQQRMSSAYGAASEESWQKQDIDRAYSRPIQAPASAGGPVRGTKGMQGTPGTGRPYRK
Specific function: Unknown
COG id: COG2979
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31055; Mature: 30924
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLRTLATVAVGVAAARGARSLANRGNREERRGGGGGLLDNLRGQDDRGGSGLGAILGG CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCCHHEECC SGSQGRSGGGLGDLLEEFGGSGALGGLGSMLGGGAAGGMLGGLLGGGGGGGTSAFGRRLN CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHH QSLMSGGEPEDEPTEDEEAMAALMIRAMIMAAKSDGRIDRDERAMLTDRLGDLSARERQF HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHH VEDELNARIDVRDFARDVPDHPGLRAQIFAAAMSAIDIDSPREREFAEDLANALGLEEKA HHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH RGHVQQRMSSAYGAASEESWQKQDIDRAYSRPIQAPASAGGPVRGTKGMQGTPGTGRPYR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC K C >Mature Secondary Structure SLLRTLATVAVGVAAARGARSLANRGNREERRGGGGGLLDNLRGQDDRGGSGLGAILGG HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCCCCCCCCCCCHHEECC SGSQGRSGGGLGDLLEEFGGSGALGGLGSMLGGGAAGGMLGGLLGGGGGGGTSAFGRRLN CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHH QSLMSGGEPEDEPTEDEEAMAALMIRAMIMAAKSDGRIDRDERAMLTDRLGDLSARERQF HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHH VEDELNARIDVRDFARDVPDHPGLRAQIFAAAMSAIDIDSPREREFAEDLANALGLEEKA HHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH RGHVQQRMSSAYGAASEESWQKQDIDRAYSRPIQAPASAGGPVRGTKGMQGTPGTGRPYR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA