Definition | Jannaschia sp. CCS1 chromosome, complete genome. |
---|---|
Accession | NC_007802 |
Length | 4,317,977 |
Click here to switch to the map view.
The map label for this gene is 89054282
Identifier: 89054282
GI number: 89054282
Start: 1777898
End: 1778815
Strand: Reverse
Name: 89054282
Synonym: Jann_1791
Alternate gene names: NA
Gene position: 1778815-1777898 (Counterclockwise)
Preceding gene: 89054283
Following gene: 89054278
Centisome position: 41.2
GC content: 64.71
Gene sequence:
>918_bases ATGTTCGATGCCCTGCCCGAGTTTCATCGCCCACCTTCCCTGCCGCGCGCGGTGCGGCCCACCGCATTGCAGCAAAGCGC CCTGTGGCTCTCGGCCACGCGACTGTTGGGCAGCAATGCGGAGATGGTGGATCTTGGCACGCGGCGGGCGCTGGTTTTGC GGCGTCGGCTCAAGATCATAGGGGATTTGGCCCTGCTTTCAAGGGCAGAACTGGGGATGTCCCCCGGTGATCTGACCGCT CTTCGACACCATCTGGGCACGCGCCATCTGGCCGTCAATGCAGAGACGATGGAGGATGCTGACGCACTGGCCCGGGCTGG ATTCCGAAGGATCTGTGCCCCCCGCGCGATCGCAGAGCTGACGCTGGATGCGTCAAGCGATGTCATGTCCGCGCGGTTGG CACAGAAATGGCGTAACAGGCTCCGCCATGGACAGTCCCAGAACCTCATGATCCAACGGCGTCCGATGCAACCAGACAAG CGGTTCTGGCTGTTCAGGGCCGAGGCATTGCAATCCCTGCGCAAATGGTATCGCCCTCTTGCGCCCGAAATGGTCGCCGC CATGGCAGCCAGCAAACCCGGTGCGGTGCAGGTCTTTACCGCCTATCATCTGGGCCGCCGCGTGGCTGCGATGTTGTTCG TCCGCCACGGGCTGCAGGCCACCTATCAGATAGGATGGAGTACACCAGAGGGCCGCAAACTGTCCGCCGGGCCCGCACTG ATGTGGCGCGCGATGGTGGAGTTGCAGGCCATGGGAACGGACCGGATCGACCTCGGCGCGGCCGACAAACGCCTCGCGCC CGGATTGGCGCGGTTCAAATGCGGCACCGGGGCCGAGATCCGCCAACTGGGCGGGACCTGGGTGGATAGCGGCTGGCGTT TCCGGCCAGCGCAGCACACCATGGCCGAGGTGGCATAG
Upstream 100 bases:
>100_bases CGCGGGCAAAAAGCGCCATGCGCTGGTGGTGCTGAAGGACTAGGCTGGTTTTCGGCGGCGTTAACCATTGCTTCATCGAA TCGGGATCAATGTTCCCCCT
Downstream 100 bases:
>100_bases TACGGATTGGGATCGTGGGATAAGGCACGCGGACGGTTGGGAATACGCGCGGGCGGTGCTCCATCCGTTGATGGTGGAAA AGACCGCGCGGATCGCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MFDALPEFHRPPSLPRAVRPTALQQSALWLSATRLLGSNAEMVDLGTRRALVLRRRLKIIGDLALLSRAELGMSPGDLTA LRHHLGTRHLAVNAETMEDADALARAGFRRICAPRAIAELTLDASSDVMSARLAQKWRNRLRHGQSQNLMIQRRPMQPDK RFWLFRAEALQSLRKWYRPLAPEMVAAMAASKPGAVQVFTAYHLGRRVAAMLFVRHGLQATYQIGWSTPEGRKLSAGPAL MWRAMVELQAMGTDRIDLGAADKRLAPGLARFKCGTGAEIRQLGGTWVDSGWRFRPAQHTMAEVA
Sequences:
>Translated_305_residues MFDALPEFHRPPSLPRAVRPTALQQSALWLSATRLLGSNAEMVDLGTRRALVLRRRLKIIGDLALLSRAELGMSPGDLTA LRHHLGTRHLAVNAETMEDADALARAGFRRICAPRAIAELTLDASSDVMSARLAQKWRNRLRHGQSQNLMIQRRPMQPDK RFWLFRAEALQSLRKWYRPLAPEMVAAMAASKPGAVQVFTAYHLGRRVAAMLFVRHGLQATYQIGWSTPEGRKLSAGPAL MWRAMVELQAMGTDRIDLGAADKRLAPGLARFKCGTGAEIRQLGGTWVDSGWRFRPAQHTMAEVA >Mature_305_residues MFDALPEFHRPPSLPRAVRPTALQQSALWLSATRLLGSNAEMVDLGTRRALVLRRRLKIIGDLALLSRAELGMSPGDLTA LRHHLGTRHLAVNAETMEDADALARAGFRRICAPRAIAELTLDASSDVMSARLAQKWRNRLRHGQSQNLMIQRRPMQPDK RFWLFRAEALQSLRKWYRPLAPEMVAAMAASKPGAVQVFTAYHLGRRVAAMLFVRHGLQATYQIGWSTPEGRKLSAGPAL MWRAMVELQAMGTDRIDLGAADKRLAPGLARFKCGTGAEIRQLGGTWVDSGWRFRPAQHTMAEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33970; Mature: 33970
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDALPEFHRPPSLPRAVRPTALQQSALWLSATRLLGSNAEMVDLGTRRALVLRRRLKII CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH GDLALLSRAELGMSPGDLTALRHHLGTRHLAVNAETMEDADALARAGFRRICAPRAIAEL HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH TLDASSDVMSARLAQKWRNRLRHGQSQNLMIQRRPMQPDKRFWLFRAEALQSLRKWYRPL HCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC APEMVAAMAASKPGAVQVFTAYHLGRRVAAMLFVRHGLQATYQIGWSTPEGRKLSAGPAL CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH MWRAMVELQAMGTDRIDLGAADKRLAPGLARFKCGTGAEIRQLGGTWVDSGWRFRPAQHT HHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHCCCCEECCCCEECCHHHH MAEVA HHHCC >Mature Secondary Structure MFDALPEFHRPPSLPRAVRPTALQQSALWLSATRLLGSNAEMVDLGTRRALVLRRRLKII CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHH GDLALLSRAELGMSPGDLTALRHHLGTRHLAVNAETMEDADALARAGFRRICAPRAIAEL HHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH TLDASSDVMSARLAQKWRNRLRHGQSQNLMIQRRPMQPDKRFWLFRAEALQSLRKWYRPL HCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC APEMVAAMAASKPGAVQVFTAYHLGRRVAAMLFVRHGLQATYQIGWSTPEGRKLSAGPAL CHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH MWRAMVELQAMGTDRIDLGAADKRLAPGLARFKCGTGAEIRQLGGTWVDSGWRFRPAQHT HHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCCCHHHHHCCCCEECCCCEECCHHHH MAEVA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA