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The map label for this gene is 89054273

Identifier: 89054273

GI number: 89054273

Start: 1770761

End: 1771561

Strand: Reverse

Name: 89054273

Synonym: Jann_1782

Alternate gene names: NA

Gene position: 1771561-1770761 (Counterclockwise)

Preceding gene: 89054274

Following gene: 89054272

Centisome position: 41.03

GC content: 66.54

Gene sequence:

>801_bases
ATGGCCAAATCCGCCCAAGCCTTCCGCACGATCCGCGAGGTCGCTGACTGGCTCGACGTGGCCGCCCATGTCCTGCGGTT
CTGGGAATCGAAATTCAGCCAGATCAAACCTGTGAAGCGTGCCGGAGGGCGGCGGTATTACCGCCCCGCCGACATGGAAT
TGGTGGGCGGGATCAAGGTCTTGCTCCATGATCGCGGCCTGACGATCCGGGGCGTGCAGAAGATGATCGCCGATGAAGGG
TTGGAGGCCGTCACCGCCCTGTCGCCGCCGGTCGATGAGTTGATCGCGGACGAGGATACGATTGAAGGGGATGCCACCGG
CGCATGGGACAGCGACACCGCAGCCGAGGTTCTGGACACACCGCTCGCCCAGGCCCTTCTTGGGCCAGACACGGACCCCG
CGCCGTCTGATGCGCCTGACACGCCCGCGCCGGACAGTCCGGCAGACGACGCGACGGGCCAGACGCTGTCCATAGAGACA
CCGACCACCGAGATACCAGCCACCGGGGCACCGATGCCGGATCTGGGTCGCCTTCCCTCATCCGGCACCCCATCGGGCCG
CGATGCGCCAGATCCCTCGCCCGCGGATGAGGCACCCACCACAGATACAGACGGCCCGTCCAAAAATCCGCGGCCCGCAC
CGTCCACCATCCTGCCCGCGTCTGATCCAGCCGAAGGCCCCCTCGGCAAACTCACGGCATTCACCCAATTGCCCATCGTC
AAACGCGCGGCACTCGCGCCCCATATTGCGGCACTGGCCCGCCTGCGTGACCGCATGTCCGCGCCGACGGACAGCCAGTA
G

Upstream 100 bases:

>100_bases
AAACGAAGGTCCGCATCACTCCGGCAGAGGGTGAATGGACAGAGGCAACGACCCGAAGCCTCCCGCAAAAAGCGGGGCGC
TTGAGCAGAGGACAAGAGCC

Downstream 100 bases:

>100_bases
TGCCGGTTGGACGAACTGGCCCTTGCGCCGCCCACAGAAATCCTTAGAAGGGCCGTCAGTCGGGCTATGGCGCAGCCTGG
TAGCGCGTCCGTCTGGGGGA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAKSAQAFRTIREVADWLDVAAHVLRFWESKFSQIKPVKRAGGRRYYRPADMELVGGIKVLLHDRGLTIRGVQKMIADEG
LEAVTALSPPVDELIADEDTIEGDATGAWDSDTAAEVLDTPLAQALLGPDTDPAPSDAPDTPAPDSPADDATGQTLSIET
PTTEIPATGAPMPDLGRLPSSGTPSGRDAPDPSPADEAPTTDTDGPSKNPRPAPSTILPASDPAEGPLGKLTAFTQLPIV
KRAALAPHIAALARLRDRMSAPTDSQ

Sequences:

>Translated_266_residues
MAKSAQAFRTIREVADWLDVAAHVLRFWESKFSQIKPVKRAGGRRYYRPADMELVGGIKVLLHDRGLTIRGVQKMIADEG
LEAVTALSPPVDELIADEDTIEGDATGAWDSDTAAEVLDTPLAQALLGPDTDPAPSDAPDTPAPDSPADDATGQTLSIET
PTTEIPATGAPMPDLGRLPSSGTPSGRDAPDPSPADEAPTTDTDGPSKNPRPAPSTILPASDPAEGPLGKLTAFTQLPIV
KRAALAPHIAALARLRDRMSAPTDSQ
>Mature_265_residues
AKSAQAFRTIREVADWLDVAAHVLRFWESKFSQIKPVKRAGGRRYYRPADMELVGGIKVLLHDRGLTIRGVQKMIADEGL
EAVTALSPPVDELIADEDTIEGDATGAWDSDTAAEVLDTPLAQALLGPDTDPAPSDAPDTPAPDSPADDATGQTLSIETP
TTEIPATGAPMPDLGRLPSSGTPSGRDAPDPSPADEAPTTDTDGPSKNPRPAPSTILPASDPAEGPLGKLTAFTQLPIVK
RAALAPHIAALARLRDRMSAPTDSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 27887; Mature: 27756

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSAQAFRTIREVADWLDVAAHVLRFWESKFSQIKPVKRAGGRRYYRPADMELVGGIKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHCCEEE
LLHDRGLTIRGVQKMIADEGLEAVTALSPPVDELIADEDTIEGDATGAWDSDTAAEVLDT
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
PLAQALLGPDTDPAPSDAPDTPAPDSPADDATGQTLSIETPTTEIPATGAPMPDLGRLPS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHCCCCC
SGTPSGRDAPDPSPADEAPTTDTDGPSKNPRPAPSTILPASDPAEGPLGKLTAFTQLPIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KRAALAPHIAALARLRDRMSAPTDSQ
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKSAQAFRTIREVADWLDVAAHVLRFWESKFSQIKPVKRAGGRRYYRPADMELVGGIKV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCHHHHCCEEE
LLHDRGLTIRGVQKMIADEGLEAVTALSPPVDELIADEDTIEGDATGAWDSDTAAEVLDT
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
PLAQALLGPDTDPAPSDAPDTPAPDSPADDATGQTLSIETPTTEIPATGAPMPDLGRLPS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHCCCCC
SGTPSGRDAPDPSPADEAPTTDTDGPSKNPRPAPSTILPASDPAEGPLGKLTAFTQLPIV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KRAALAPHIAALARLRDRMSAPTDSQ
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1961742 [H]