Definition Jannaschia sp. CCS1 chromosome, complete genome.
Accession NC_007802
Length 4,317,977

Click here to switch to the map view.

The map label for this gene is 89054270

Identifier: 89054270

GI number: 89054270

Start: 1767141

End: 1768472

Strand: Reverse

Name: 89054270

Synonym: Jann_1779

Alternate gene names: NA

Gene position: 1768472-1767141 (Counterclockwise)

Preceding gene: 89054272

Following gene: 89054268

Centisome position: 40.96

GC content: 61.64

Gene sequence:

>1332_bases
ATGAACCAAGCCTATCGCCGCAATGTCCGCAAGATCGACCCCACCAAAGGCGTGATGCTGCCCGATGGCACGCTCAACGA
CAATGACCGGATCGAGATCGGGCCCACGGCGCTGGCCTACGCGGAATGGGCCGCGGCGGGCCTGACCCTGCCCAACCTGC
AAACCATGCGCGAGTATCGCCTTGGCCGCCTTGTGGGGCAATTGCAGGAACGCGACCTTGCGGGCGTGTTGATGACCGAC
CCGCTCAACATCCGCTACGCCACCGATGCGACCAACATGCAGCTTTGGAACACCCACAACCCGTTCCGCGCCTGTCTGGT
CTGCGCCGACGGGCATATGGTGCTGTGGGAATACAAGAACGCCCCTTTTCTGGCCGAGCATAATCCGCTGGTGCGCGAAA
TCCGGTCCGGCGCGTCGATGTTCTACTTCACAGCCGGGGATCGCGGCGACGCGGTGGCGGAAACCTTCAGCGGTGAAGTG
GCCGACCTGTTGCGCGAACATGCGGGCACGAACACCCGGCTCGCCGTCGACAAGATCATGCTCCACGGCGCGCGGGCGCT
GGAGGCGCGGGGCCTGACGGTATCTGATGGGGAGTTGGTCACGGAACATGCCCGCAAGATCAAATGCGCCGATGAAATCC
TCGCCATGCGCTGCGCGGTGGACGCCTGTGAAAAAAGCCTCAAGGCCATGGAGGACGCGATTGAACCGGGCAAATCCGAG
GATGAAATCTGGGCCGTTCTGCACGCGGAAAACATCAAACGCGGCGGCGAATGGATTGAGACGCGGCTGTTTTCCTCTGG
CCCCCGCACCAACCCGTGGTTTCAGGAATGCGGTCCCCGCACGCTTCTGCCCAATGAAATCAGTGCTTTGGATACGGACC
TGATCGGCTGTTACGGCCTCTGCGTGGATATCTCCCGCACCTGGTGGACCGGCCCCGAAAAGCCGCGCCCCGATATGATC
GAGGCGATGCAGCACGCCCATGAGCATATCATGGTCAATATGGACCGTCTGAAACCCGGCCGCTCCATCAATGATCTGGT
CCATAACGGCCACAGGCTGGCCGACAAATACTGGGCGCGGAAATACTCCTGCCAGATGCACGGCGTGGGCCTCTGCGATG
AATGGCCCCACGTGGGCTACCCCGACCATCACCATGACGATGCGTTCGACTACGTGCTGGAGCCCGGAATGATGCTGTGT
GTGGAGGCGTTGGTGGGCGAAGAAGGCGGCGATTTCTGCATCAAGCTGGAAGATCAGGTGCTGATCACCGAAGACGGGTA
CGAGAACCTGACGACCTATCCCTTCGATGCGGCGCTGATGGGGGCCTCCTAG

Upstream 100 bases:

>100_bases
TGATCTTGTAGAACATGGTCCATTTCCGACCCTTTCGCGGCGCGATCTGACACGCGGAGGCGATCTGACCGCGCAAGGCT
CATCCTAAGGGAGAGTGACC

Downstream 100 bases:

>100_bases
ACGCCGGGTTCAGTGATCTCGAACATCCCCACAATCGCCCGGTGATCGGACCCCAATCTTGGGTGCACGGATTGGATGCC
GCCCCGCCCCGGGAGGATCA

Product: peptidase M24

Products: NA

Alternate protein names: Proline Dipeptidase; Aminopeptidase; Peptidase; M24 Family Metallopeptidase; Xaa-Pro Aminopeptidase-Like Protein; CAAX Amino Terminal Protease Family Transmembrane; Xaa-Pro Dipeptidase; Xaa-Pro Aminopeptidase

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYRLGRLVGQLQERDLAGVLMTD
PLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKNAPFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEV
ADLLREHAGTNTRLAVDKIMLHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE
DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGLCVDISRTWWTGPEKPRPDMI
EAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWARKYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLC
VEALVGEEGGDFCIKLEDQVLITEDGYENLTTYPFDAALMGAS

Sequences:

>Translated_443_residues
MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYRLGRLVGQLQERDLAGVLMTD
PLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKNAPFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEV
ADLLREHAGTNTRLAVDKIMLHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE
DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGLCVDISRTWWTGPEKPRPDMI
EAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWARKYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLC
VEALVGEEGGDFCIKLEDQVLITEDGYENLTTYPFDAALMGAS
>Mature_443_residues
MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYRLGRLVGQLQERDLAGVLMTD
PLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKNAPFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEV
ADLLREHAGTNTRLAVDKIMLHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE
DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGLCVDISRTWWTGPEKPRPDMI
EAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWARKYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLC
VEALVGEEGGDFCIKLEDQVLITEDGYENLTTYPFDAALMGAS

Specific function: Unknown

COG id: COG0006

COG function: function code E; Xaa-Pro aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49668; Mature: 49668

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYR
CCHHHHCCCCCCCCCCCEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHH
LGRLVGQLQERDLAGVLMTDPLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKN
HHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEECCCCCCEEEEEEECCCEEEEEECC
APFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEVADLLREHAGTNTRLAVDKIM
CCEEECCCHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH
LHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE
HHCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGL
CCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH
CVDISRTWWTGPEKPRPDMIEAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWAR
EEECCHHCCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHCCHHHHHHHHHH
KYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLCVEALVGEEGGDFCIKLEDQV
HHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECEE
LITEDGYENLTTYPFDAALMGAS
EEECCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MNQAYRRNVRKIDPTKGVMLPDGTLNDNDRIEIGPTALAYAEWAAAGLTLPNLQTMREYR
CCHHHHCCCCCCCCCCCEECCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHH
LGRLVGQLQERDLAGVLMTDPLNIRYATDATNMQLWNTHNPFRACLVCADGHMVLWEYKN
HHHHHHHHHHCCCCCEEEECCCEEEEECCCCCEEEECCCCCCEEEEEEECCCEEEEEECC
APFLAEHNPLVREIRSGASMFYFTAGDRGDAVAETFSGEVADLLREHAGTNTRLAVDKIM
CCEEECCCHHHHHHHCCCCEEEEECCCCCCHHHHHHCCHHHHHHHHHCCCCCCHHHHHHH
LHGARALEARGLTVSDGELVTEHARKIKCADEILAMRCAVDACEKSLKAMEDAIEPGKSE
HHCCHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DEIWAVLHAENIKRGGEWIETRLFSSGPRTNPWFQECGPRTLLPNEISALDTDLIGCYGL
CCEEEEEEHHHHHCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHH
CVDISRTWWTGPEKPRPDMIEAMQHAHEHIMVNMDRLKPGRSINDLVHNGHRLADKYWAR
EEECCHHCCCCCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCHHHHHHCCHHHHHHHHHH
KYSCQMHGVGLCDEWPHVGYPDHHHDDAFDYVLEPGMMLCVEALVGEEGGDFCIKLEDQV
HHCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCEEEEEECEE
LITEDGYENLTTYPFDAALMGAS
EEECCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA