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The map label for this gene is 89054218

Identifier: 89054218

GI number: 89054218

Start: 1717028

End: 1719574

Strand: Reverse

Name: 89054218

Synonym: Jann_1727

Alternate gene names: NA

Gene position: 1719574-1717028 (Counterclockwise)

Preceding gene: 89054219

Following gene: 89054217

Centisome position: 39.82

GC content: 64.94

Gene sequence:

>2547_bases
ATGACCGACCAGAGCGCCGCAAAAGACCAGGTAGAAGGCCCCGTCATCGCGGATGGCGTGGATGAGGAGCCGGTGGAAAG
CAACCGCCGCCTGTTTGAGGGCCGGTCGTTCCTGATCGTCGGTATCCTGTCGGTCCTCTATGCTGGCTTCCACATGGCCG
CGCTGAACGGATTGTCGCTGTCCTCCATGACCGGGATCGACCTGCCTTTCCTGCCGCAATTCCCGATGGAGACGTGGAAT
TTCCGCATCGTCCACATCGCGGGCGCGCTGGCGCTGGGGTTCATGTTGTTCTCCGCCCATACCTTTGGCACGGACGCCGG
GTCCGATCGCTCCACCAAGGTGATCTCCCTCATCGCGGCCCTCTTCGCATTGCCCGCCCTGTTCGCAGGCGTCACGGTTC
TGGGCTTCATCGGCCAGATCAACGGTGGCCAGCTGCCCCAAATGGGCGGCCTGACCACCTGGGCCGCCTTCCCCGGCACG
GATATCTACAATGCGGAGGTCTACAGCTTCGGCATCCCGCTGCTGGTCGCCACCGGCGGCGCGATTGTGCTTGGCTGGTT
CGAGCGTCAGGGCCGCGGGTCCTTCGCTGCGTCCGACATCGTGCTGGCCCTCTGCGCGCTGGTCGTGGCGCTTTACCTGA
TCCCGATCTATTCCACCGCCGCACGCAACTCCGTCGGCACGTCCTTCGTGCCCATCGGCGTGGCCTTTGCCGCCACGGCG
GGCGCGGCCATGATCCTGGAGCTGACCCGCCGCGTTGCGGGCCTGGCGCTGGTGATCATCACCGGTATCTTTCTCATTTA
CACCTTCACGGCTCACCTCCTGCCCGGCATCCTGGCGGTGCAGAACCCCTATGACTGGCAGCGCTTCTTCGGCTTCGTCT
ACACCGATGCGGGCATCCTTGGGCCAACCACTGCCGTGTCCTCCACCTACATCATCCTGTTCATCATCTTCGCAGCCTTC
CTTCAGGCCTCCAAGGTGGGCGACTACTTCGTGAACTTTGCCTTCGCCGCCGCCGGGCGCGCGCGTGGCGGCCCCGCCAA
GGTGGCGATCTTCGCATCGGGCCTGATGGGCATGATCAACGGCACCAGCGCCGGTAACGTGGTCGCCACAGGCTCCCTCA
CGATCCCGCTGATGAAGAAGGTCGGCTACCACAAGAAAACTGCCGGAGCGGTTGAGGCCGCAGCTTCCACAGGCGGGCAG
ATCATGCCGCCGATCATGGGCGCAGGCGCGTTCATCATGGCCGAGATCACCGGCATCCCCTATCAGGACATCGCCATCGC
GGCGCTGATCCCCGCCGTCCTCTATTTCACCTCGATCTACTTCATGGTGGATTTCGAGGCCGCGAAACTGGGCATGCGCG
GGATGCGAGAGGATGAGCTGCCGAAGTTCAAGGAAATGGCGAGGAAAGTCTTCCTGTTCCTGCCGATCATCATCCTGATC
TTCGCTTTGTTCATGGGCTATTCGGTGATCCGGGCCGGAACCCTCGCCACCATCGCCGCCGTTGTCGTCTCCTGGGCGGT
GCCCGAACATTTCACCCCGCGCGGTGGCTGGTCAATCCAGCGTCTGTTCGTGCTGGCGATCACGGCGATGACCATCGCGC
TCACGCTGGTCTGGATCGTCACACCCGCGCCCGCGCCGGGCCAACCCCAGCCCGCCCTGATCACCAGCCTCGGCACGATC
ACCGGGCTGATCATCGTGGCCGCCTTCGTCTATATCTCCATCGTCGAGTTCATGAAGCCCGACAGCGCCGTGGGCCTTGG
CCTCAGGGGCCTGCTGCACGGGCTGGAGATCGCGGGGGTCATGTCGATCCAGATCATCGCGGTCTGTGCCTGTGCGGGCA
TCATCGTGGGCGTGATCAGCCTGACGGGCGTTGGCGCGCGCTTCTCCGCCGTGCTGCTGGACCTCGCCGGTGTCTCCCAG
CTTCTGGCGCTCTTCTTCGCCATGTGCATCGCGATCCTTCTGGGGATGGGCATGCCGACCACGGCCGCCTATGCGGTCGC
GGCCTCCGTCGTCGCCCCGGGCCTCGTGTCCCTCGGCATCCCGCAGCTGACGGCGCATTTCTTCGTCTTCTACTTCGCCG
TCGTCTCGGCCATCACGCCGCCCGTGGCGCTGGCCTCTTATGCGGCGGCGGGCATCTCGGGCGCGAACCCGATGGAGACC
TCTGTCGCCTCCTTCAAGATCGGCATCGCCGCGTTCATCGTGCCCTTCATGTTCTTCTACAACGGCAGCCTGCTGATGCA
GGGCCCCATCGTGGAGGTTGCAGGCGAGATGGTGCATGAGGCGCCTGCCTGGTACGACATCGCCCGCGCAGGCATCACCG
CCATCCTTGGCATCTTCCTGCTGACGTCGGGCATCCAGGGCTGGTTCCTGGGCGGACGGGCCGTCTGGTTCCTGCGCGCG
GGCCTGATCATCGCGGCGCTTCTACTGATCGCAGGCGGCATCGCGACGGACCTCGCCGGTGTTGGCCTGGCCGTGGCGAT
CTTCCTGATCCAGCGGCTCGTCCGACCGGCCCAGGGCACGTCCATTCCGGTGCGCGGGGCAGATTAA

Upstream 100 bases:

>100_bases
TGCCAAACTGAAAAAGCCGCTGGACGAGATTTTGAGCGTGCGGGACTGACCCCCCGCCTCTCCTCTCACACCAGCCCACC
AGACCCCAAGGGACACGACC

Downstream 100 bases:

>100_bases
CCCCGCCCACATGTGAAAAAACCTCCGACGCCCCCTACCCAGCGGGGCGTCGATCTACTTTAACGGCCCCCATGATCACG
CTGCACCAATCGCCCACGGA

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; Inner Membrane Protein; TRAP-Type Transporter Permease Component; Permease; TRAP-Type Transport System Permease; TRAP Transporter Large Permease; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transporter Fused Permeases; C4-Dicarboxylate Transporter; TRAP Type Transporter Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; Integral Membrane Protein; Transcriptional Regulator DeoR Family; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transport System; TRAP Transporter Membrane-Spanning Component

Number of amino acids: Translated: 848; Mature: 847

Protein sequence:

>848_residues
MTDQSAAKDQVEGPVIADGVDEEPVESNRRLFEGRSFLIVGILSVLYAGFHMAALNGLSLSSMTGIDLPFLPQFPMETWN
FRIVHIAGALALGFMLFSAHTFGTDAGSDRSTKVISLIAALFALPALFAGVTVLGFIGQINGGQLPQMGGLTTWAAFPGT
DIYNAEVYSFGIPLLVATGGAIVLGWFERQGRGSFAASDIVLALCALVVALYLIPIYSTAARNSVGTSFVPIGVAFAATA
GAAMILELTRRVAGLALVIITGIFLIYTFTAHLLPGILAVQNPYDWQRFFGFVYTDAGILGPTTAVSSTYIILFIIFAAF
LQASKVGDYFVNFAFAAAGRARGGPAKVAIFASGLMGMINGTSAGNVVATGSLTIPLMKKVGYHKKTAGAVEAAASTGGQ
IMPPIMGAGAFIMAEITGIPYQDIAIAALIPAVLYFTSIYFMVDFEAAKLGMRGMREDELPKFKEMARKVFLFLPIIILI
FALFMGYSVIRAGTLATIAAVVVSWAVPEHFTPRGGWSIQRLFVLAITAMTIALTLVWIVTPAPAPGQPQPALITSLGTI
TGLIIVAAFVYISIVEFMKPDSAVGLGLRGLLHGLEIAGVMSIQIIAVCACAGIIVGVISLTGVGARFSAVLLDLAGVSQ
LLALFFAMCIAILLGMGMPTTAAYAVAASVVAPGLVSLGIPQLTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMET
SVASFKIGIAAFIVPFMFFYNGSLLMQGPIVEVAGEMVHEAPAWYDIARAGITAILGIFLLTSGIQGWFLGGRAVWFLRA
GLIIAALLLIAGGIATDLAGVGLAVAIFLIQRLVRPAQGTSIPVRGAD

Sequences:

>Translated_848_residues
MTDQSAAKDQVEGPVIADGVDEEPVESNRRLFEGRSFLIVGILSVLYAGFHMAALNGLSLSSMTGIDLPFLPQFPMETWN
FRIVHIAGALALGFMLFSAHTFGTDAGSDRSTKVISLIAALFALPALFAGVTVLGFIGQINGGQLPQMGGLTTWAAFPGT
DIYNAEVYSFGIPLLVATGGAIVLGWFERQGRGSFAASDIVLALCALVVALYLIPIYSTAARNSVGTSFVPIGVAFAATA
GAAMILELTRRVAGLALVIITGIFLIYTFTAHLLPGILAVQNPYDWQRFFGFVYTDAGILGPTTAVSSTYIILFIIFAAF
LQASKVGDYFVNFAFAAAGRARGGPAKVAIFASGLMGMINGTSAGNVVATGSLTIPLMKKVGYHKKTAGAVEAAASTGGQ
IMPPIMGAGAFIMAEITGIPYQDIAIAALIPAVLYFTSIYFMVDFEAAKLGMRGMREDELPKFKEMARKVFLFLPIIILI
FALFMGYSVIRAGTLATIAAVVVSWAVPEHFTPRGGWSIQRLFVLAITAMTIALTLVWIVTPAPAPGQPQPALITSLGTI
TGLIIVAAFVYISIVEFMKPDSAVGLGLRGLLHGLEIAGVMSIQIIAVCACAGIIVGVISLTGVGARFSAVLLDLAGVSQ
LLALFFAMCIAILLGMGMPTTAAYAVAASVVAPGLVSLGIPQLTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMET
SVASFKIGIAAFIVPFMFFYNGSLLMQGPIVEVAGEMVHEAPAWYDIARAGITAILGIFLLTSGIQGWFLGGRAVWFLRA
GLIIAALLLIAGGIATDLAGVGLAVAIFLIQRLVRPAQGTSIPVRGAD
>Mature_847_residues
TDQSAAKDQVEGPVIADGVDEEPVESNRRLFEGRSFLIVGILSVLYAGFHMAALNGLSLSSMTGIDLPFLPQFPMETWNF
RIVHIAGALALGFMLFSAHTFGTDAGSDRSTKVISLIAALFALPALFAGVTVLGFIGQINGGQLPQMGGLTTWAAFPGTD
IYNAEVYSFGIPLLVATGGAIVLGWFERQGRGSFAASDIVLALCALVVALYLIPIYSTAARNSVGTSFVPIGVAFAATAG
AAMILELTRRVAGLALVIITGIFLIYTFTAHLLPGILAVQNPYDWQRFFGFVYTDAGILGPTTAVSSTYIILFIIFAAFL
QASKVGDYFVNFAFAAAGRARGGPAKVAIFASGLMGMINGTSAGNVVATGSLTIPLMKKVGYHKKTAGAVEAAASTGGQI
MPPIMGAGAFIMAEITGIPYQDIAIAALIPAVLYFTSIYFMVDFEAAKLGMRGMREDELPKFKEMARKVFLFLPIIILIF
ALFMGYSVIRAGTLATIAAVVVSWAVPEHFTPRGGWSIQRLFVLAITAMTIALTLVWIVTPAPAPGQPQPALITSLGTIT
GLIIVAAFVYISIVEFMKPDSAVGLGLRGLLHGLEIAGVMSIQIIAVCACAGIIVGVISLTGVGARFSAVLLDLAGVSQL
LALFFAMCIAILLGMGMPTTAAYAVAASVVAPGLVSLGIPQLTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMETS
VASFKIGIAAFIVPFMFFYNGSLLMQGPIVEVAGEMVHEAPAWYDIARAGITAILGIFLLTSGIQGWFLGGRAVWFLRAG
LIIAALLLIAGGIATDLAGVGLAVAIFLIQRLVRPAQGTSIPVRGAD

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88583; Mature: 88452

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQSAAKDQVEGPVIADGVDEEPVESNRRLFEGRSFLIVGILSVLYAGFHMAALNGLSL
CCCCCCCHHHCCCCEEECCCCCCCHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SSMTGIDLPFLPQFPMETWNFRIVHIAGALALGFMLFSAHTFGTDAGSDRSTKVISLIAA
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LFALPALFAGVTVLGFIGQINGGQLPQMGGLTTWAAFPGTDIYNAEVYSFGIPLLVATGG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCEEECCC
AIVLGWFERQGRGSFAASDIVLALCALVVALYLIPIYSTAARNSVGTSFVPIGVAFAATA
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GAAMILELTRRVAGLALVIITGIFLIYTFTAHLLPGILAVQNPYDWQRFFGFVYTDAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
GPTTAVSSTYIILFIIFAAFLQASKVGDYFVNFAFAAAGRARGGPAKVAIFASGLMGMIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCC
GTSAGNVVATGSLTIPLMKKVGYHKKTAGAVEAAASTGGQIMPPIMGAGAFIMAEITGIP
CCCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCEEEHHCCCCC
YQDIAIAALIPAVLYFTSIYFMVDFEAAKLGMRGMREDELPKFKEMARKVFLFLPIIILI
HHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FALFMGYSVIRAGTLATIAAVVVSWAVPEHFTPRGGWSIQRLFVLAITAMTIALTLVWIV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TPAPAPGQPQPALITSLGTITGLIIVAAFVYISIVEFMKPDSAVGLGLRGLLHGLEIAGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MSIQIIAVCACAGIIVGVISLTGVGARFSAVLLDLAGVSQLLALFFAMCIAILLGMGMPT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAAYAVAASVVAPGLVSLGIPQLTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMET
HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH
SVASFKIGIAAFIVPFMFFYNGSLLMQGPIVEVAGEMVHEAPAWYDIARAGITAILGIFL
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LTSGIQGWFLGGRAVWFLRAGLIIAALLLIAGGIATDLAGVGLAVAIFLIQRLVRPAQGT
HHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SIPVRGAD
CCCCCCCC
>Mature Secondary Structure 
TDQSAAKDQVEGPVIADGVDEEPVESNRRLFEGRSFLIVGILSVLYAGFHMAALNGLSL
CCCCCCHHHCCCCEEECCCCCCCHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SSMTGIDLPFLPQFPMETWNFRIVHIAGALALGFMLFSAHTFGTDAGSDRSTKVISLIAA
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LFALPALFAGVTVLGFIGQINGGQLPQMGGLTTWAAFPGTDIYNAEVYSFGIPLLVATGG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCEEECCC
AIVLGWFERQGRGSFAASDIVLALCALVVALYLIPIYSTAARNSVGTSFVPIGVAFAATA
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
GAAMILELTRRVAGLALVIITGIFLIYTFTAHLLPGILAVQNPYDWQRFFGFVYTDAGIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
GPTTAVSSTYIILFIIFAAFLQASKVGDYFVNFAFAAAGRARGGPAKVAIFASGLMGMIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCC
GTSAGNVVATGSLTIPLMKKVGYHKKTAGAVEAAASTGGQIMPPIMGAGAFIMAEITGIP
CCCCCCEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCEEEHHCCCCC
YQDIAIAALIPAVLYFTSIYFMVDFEAAKLGMRGMREDELPKFKEMARKVFLFLPIIILI
HHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FALFMGYSVIRAGTLATIAAVVVSWAVPEHFTPRGGWSIQRLFVLAITAMTIALTLVWIV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TPAPAPGQPQPALITSLGTITGLIIVAAFVYISIVEFMKPDSAVGLGLRGLLHGLEIAGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
MSIQIIAVCACAGIIVGVISLTGVGARFSAVLLDLAGVSQLLALFFAMCIAILLGMGMPT
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TAAYAVAASVVAPGLVSLGIPQLTAHFFVFYFAVVSAITPPVALASYAAAGISGANPMET
HHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHH
SVASFKIGIAAFIVPFMFFYNGSLLMQGPIVEVAGEMVHEAPAWYDIARAGITAILGIFL
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LTSGIQGWFLGGRAVWFLRAGLIIAALLLIAGGIATDLAGVGLAVAIFLIQRLVRPAQGT
HHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SIPVRGAD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA